Gene Tcr_0979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0979 
Symbol 
ID3761560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1057763 
End bp1058560 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content44% 
IMG OID637785700 
ProductABC transporter related 
Protein accessionYP_391248 
Protein GI78485323 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGTCG AATCGATAAT CGAAATAAAA AATTTAAGCT TTTCTCGTGG TGATCGTAAA 
ATCTTTGAAA ACCTTTCGTT GGATATTCCA GCGGGGAAAG TGACAGCGAT TATGGGGCCG
AGTGGCACGG GAAAAACAAC GTTATTAAAG CTGATAGCTG GACAGTTGCA CCCTGATAAA
GGGCAAGTGC TGGTGAACGG AGAAGATGTT CATCAGTTAA GAAGAAAGAA ACTGTATGAG
CTGCGTCGAA AAATGGGCAT GCTTTTTCAG AGCGGGGCTT TATTAACGGA TTTAAATGTC
TTCGATAATG TGGCCTTTCC TGTTCGAGAA CATACAAAGC TCCCAGAAGA GATTATCCGG
CCTTTAGTCT TAATGAAGCT ACAAGCTGTC GGGTTAAGAG GAGCGCAGGC ATTGAAGGTA
TCAGAACTGT CTGGAGGAAT GGCACGGCGC GTTGCTTTAG CAAGAGCCAT TGCGCTGGAT
CCAGACATGA TTTTTTATGA TGAGCCTTTT GTTGGACAGG ACCCTATTAC GATGGGGGTA
TTGATTGAAC TTATTCGCAA GTTAAATGAC AGCCTTAATT TAACCAGTGT TGCGGTATCA
CATGATGTGA ATGAAGTGTT GTCGATCGCG GACTACGCCT GTGTTTTATC AGAAGGGCGG
ATTATTGCTG AAGGCACGGC AGAGTCTTTG CTGGAATCCT CTTCAGACTA TGTAAAACAG
TTTCTGCAAG GCCTGCCGGA TGGACCGGTT CCTTTCGATT ACCCCACAAA ACCTTACTTA
CAGGATTTAA GCATATGA
 
Protein sequence
MSVESIIEIK NLSFSRGDRK IFENLSLDIP AGKVTAIMGP SGTGKTTLLK LIAGQLHPDK 
GQVLVNGEDV HQLRRKKLYE LRRKMGMLFQ SGALLTDLNV FDNVAFPVRE HTKLPEEIIR
PLVLMKLQAV GLRGAQALKV SELSGGMARR VALARAIALD PDMIFYDEPF VGQDPITMGV
LIELIRKLND SLNLTSVAVS HDVNEVLSIA DYACVLSEGR IIAEGTAESL LESSSDYVKQ
FLQGLPDGPV PFDYPTKPYL QDLSI