Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0962 |
Symbol | |
ID | 3761543 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 1040308 |
End bp | 1041165 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637785683 |
Product | periplasmic binding protein |
Protein accession | YP_391231 |
Protein GI | 78485306 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTCAAA ACGTTTTCAG TACAACTGAC AAAAAAACGT GGCTACTCAG TTTGTTACTG AGTGGCTTAC TATGGAGCAA TTGGGTTAAT GCGGCACCTT ATGAACGCAT CGTTACCCTC TCCCCACATC TGACTGAAAT GGTTTTTTCT GCAGGCGCGG GATCGAAACT TGTTGGCGTC ATTGCCTACT CTAACTATCC CACTTCCGCC AAAACGCTAC CGATTGTCGG AACCTACAAT GCTTTGAACC TGGAAAAAAT CATTCAATTA AAACCTGATC TGATTCTCGC CTGGCAATCC AGCAATCAAC CCAAAGCACT TGAACGACTC CAGCAACTCG GATTTAAAGT GGAATTGTTT GAACCGCGTA AACTAAGTGA CATTCCTCGC GACATCAAAC GCATCGGCAC ACTTCTAAAC ACGTCACACA TTGCTGACAT TACGGCTAAT CAATTGACGA CAACATTAAA GACAATCAAG CGACAATACC AAGGATTAAC AAAAGTACGG TTTTTCTATC AGATATGGGA TGACCCGATG ATGACGGTCA ACGGTCAAGT TTTTATCAGC CAAGCCATTG AAACCTGCGG AGCTGAAAAC ATTTTTGCAC AGCAAAAAAT CCTGGCTCCC GAAGTGGATA CGGAAACCGT TTTAAAAAGA AATCCGAGTG TTATTTTGCT GGGAGGCGAA AATGCTGTCC AAAAAATTTG GCGTCAAAAT TGGTTAAAGT GGCCACAAAT CGATGCGGTT AAACACAAAC AGATATATTT AATCAACACC AATCACTTCC AACGGCCTAC GGCACGTTTA ATCCAGCATT TACCCGAGCT TTGCCAACGG ATTCAAAAAG CCAGATAA
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Protein sequence | MIQNVFSTTD KKTWLLSLLL SGLLWSNWVN AAPYERIVTL SPHLTEMVFS AGAGSKLVGV IAYSNYPTSA KTLPIVGTYN ALNLEKIIQL KPDLILAWQS SNQPKALERL QQLGFKVELF EPRKLSDIPR DIKRIGTLLN TSHIADITAN QLTTTLKTIK RQYQGLTKVR FFYQIWDDPM MTVNGQVFIS QAIETCGAEN IFAQQKILAP EVDTETVLKR NPSVILLGGE NAVQKIWRQN WLKWPQIDAV KHKQIYLINT NHFQRPTARL IQHLPELCQR IQKAR
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