Gene Tcr_0962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0962 
Symbol 
ID3761543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1040308 
End bp1041165 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content43% 
IMG OID637785683 
Productperiplasmic binding protein 
Protein accessionYP_391231 
Protein GI78485306 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCAAA ACGTTTTCAG TACAACTGAC AAAAAAACGT GGCTACTCAG TTTGTTACTG 
AGTGGCTTAC TATGGAGCAA TTGGGTTAAT GCGGCACCTT ATGAACGCAT CGTTACCCTC
TCCCCACATC TGACTGAAAT GGTTTTTTCT GCAGGCGCGG GATCGAAACT TGTTGGCGTC
ATTGCCTACT CTAACTATCC CACTTCCGCC AAAACGCTAC CGATTGTCGG AACCTACAAT
GCTTTGAACC TGGAAAAAAT CATTCAATTA AAACCTGATC TGATTCTCGC CTGGCAATCC
AGCAATCAAC CCAAAGCACT TGAACGACTC CAGCAACTCG GATTTAAAGT GGAATTGTTT
GAACCGCGTA AACTAAGTGA CATTCCTCGC GACATCAAAC GCATCGGCAC ACTTCTAAAC
ACGTCACACA TTGCTGACAT TACGGCTAAT CAATTGACGA CAACATTAAA GACAATCAAG
CGACAATACC AAGGATTAAC AAAAGTACGG TTTTTCTATC AGATATGGGA TGACCCGATG
ATGACGGTCA ACGGTCAAGT TTTTATCAGC CAAGCCATTG AAACCTGCGG AGCTGAAAAC
ATTTTTGCAC AGCAAAAAAT CCTGGCTCCC GAAGTGGATA CGGAAACCGT TTTAAAAAGA
AATCCGAGTG TTATTTTGCT GGGAGGCGAA AATGCTGTCC AAAAAATTTG GCGTCAAAAT
TGGTTAAAGT GGCCACAAAT CGATGCGGTT AAACACAAAC AGATATATTT AATCAACACC
AATCACTTCC AACGGCCTAC GGCACGTTTA ATCCAGCATT TACCCGAGCT TTGCCAACGG
ATTCAAAAAG CCAGATAA
 
Protein sequence
MIQNVFSTTD KKTWLLSLLL SGLLWSNWVN AAPYERIVTL SPHLTEMVFS AGAGSKLVGV 
IAYSNYPTSA KTLPIVGTYN ALNLEKIIQL KPDLILAWQS SNQPKALERL QQLGFKVELF
EPRKLSDIPR DIKRIGTLLN TSHIADITAN QLTTTLKTIK RQYQGLTKVR FFYQIWDDPM
MTVNGQVFIS QAIETCGAEN IFAQQKILAP EVDTETVLKR NPSVILLGGE NAVQKIWRQN
WLKWPQIDAV KHKQIYLINT NHFQRPTARL IQHLPELCQR IQKAR