| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0950 |
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| Symbol | |
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| ID | 3762047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 1024996 |
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| End bp | 1029024 |
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| Gene Length | 4029 bp |
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| Protein Length | 1342 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637785671 |
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| Product | ATP-dependent helicase HrpA |
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| Protein accession | YP_391219 |
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| Protein GI | 78485294 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01967] ATP-dependent helicase HrpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTTCT ATTTGAAATT CGAGTGTCTA TTGTCTGCTT CCATGTCTGA ATTGATTGAT
TTTTGTGATA AATCCGCTGT TATAAAAGCC GTTGACCAAG CGTTGGTGAA GGATCGATTT
TTTCTGTCTA AACAGATACA ACGGTTTAAC GTACATGCAA ACACCTCAGA GGCCGATTTT
GAAGCGTTAA AAAATGACCA GGCCTGGTTA AAATTCTGTG ATCGACTTGC TAAGTCCGTT
GCAACTGTCC AAAAGAATCA ACAAGCTGTT CCTAAAATCA CTTATGACAA TTTGCCTGTC
GCTGAACGAC GTGACGAAAT ACTGGAGTTG ATTCAAAACA ATCAAGTCGT GGTCATTGCT
GGTGAGACAG GGTCGGGGAA AACAACTCAA ATTCCAAAAA TCTGTCTGGA AGCGGGTCGG
GGTGTGTTTG GCCGCATCGG TTGTACGCAA CCGAGAAGAT TGGCTGCACG CAGTGTGGCG
GAGCGTATTG CTGAAGAGCT CGGTTCAAGT CTTGGTCAGT TGGTGGGTTA TCAGGTTCGA
TTTCATGATC AAGTGCACCA GCAAAGTTTG TTGAAAGTCA TGACCGATGG TATTTTGCTG
GCCGAAATTC AGAATGACCC TTATTTAAAT CAGTACGACA CCATTATTAT TGATGAAGCT
CATGAACGCT CCATTAACAT CGATTTTTTA TTAGGCATCT TGAAAAAACT GTTGCCTAAA
CGCCGCGATT TAAAGTTGAT TATCACTTCG GCAACGATTG ACACCGAGCG CTTCGCCTCC
TTTTTTGAAG GAGCACCGAT TATTGAAGTG AGTGGTCGTA CTTATCCGGT GGAAGTACGT
TATAATCCGT TGGTCAAAAT AGAAGATGAC GAGGGAAATG AATTTGAGCA AGATATTCCC
ACCGCCATTG TGTATGCCTT GGAAGAGTTG TCTGAGATTG ACCCGTTTGG TGATGTGTTG
GTCTTTCAGG TGGGGGAGCG GGACATTAAA GAAACCGCAG AGGTGCTCCG TAAACAGAAT
TTAAAGAATA CCGAAATTGT GCCGCTTTAT GCTCGCTTGA GCATGGCAGA GCAAAATAAA
GTGTTTCAAA CCTCGCAGAA ACGTCGCGTC ATTTTATCCA CCAATGTGGC AGAAACCTCT
TTGACCGTGC CGGGCATTAA GTTTGTGATA GACCCAGGCC TGGTCAGAAT CAGTCGTTAT
TCGGTGCGCT CTAAAGTACA ACGCTTACCG ATTGAGAAAA TTTCGCAAGC GTCCGCTAAT
CAGCGCGCCG GCCGCTGTGG TCGTGTCAGT TCGGGTGTCT GCATCCGGTT ATACGATGAA
GACGATTTCA AGAGTCGTCC TGAGTTCACC CCTCCGGAAA TCCACCGCAC TTCGCTGGCG
ACGGTCATTT TACAAATGAC GCAAATGAAA CTGGGGTCAG TAAAACATTT TCCATTTATT
GAACCGCCGG AAGACAAAGC GATTAATGAT GGCTTTCGTC AGTTGCATGA AATTGGCGCG
TTGGATGAAA AGCGTCGTTT GACCGAAAGT GGTCGTCATC TGGCGAAACT ACCACTCGAT
CCGAGAATGG CAAAAATGGT GTTGGAAGGT CAGAAAAACG GCGTGTTGGC CGAAGTGTTG
ATTATCGCGG CCGCCATCAG TATTCAAGAC CCGCGCGATA TGAATGAATC GAACCGTCAA
GCGGCGAACC AAGCCCACAA GGTTTTTGAA GACCCACGGT CAGACTTTTT GTTCTTTTTA
AACTTATGGC GTTTTTATGA AGACAAACGA CGTCACTTGA GCCAAAACAA ATTGCGCAAA
TTGTGTAAAA CCAACTTTTT GTCGTATTTG CGTATGAAAG AGTGGCATGA CTTGTTTTTT
CAGTTAGAAA TGAGTTTGAA ACGCATCAGC GTTAAAGTCG GTGAGCTGCA TTTGTATGAA
GAAGTCAAAA AAGGTAAAAC CGTCACAGAG CGACTGTCGG ACACGCATTC TATGGCCGTG
CATCGTTCCC TAATGGCTGG TTTATTAGGT AACATTGCCA TGCGTGACGA TGAAAATAGC
TATTTGGGCG CGCGTAATAC CAAGTTGTTT ATTCACCCAA GCTCGGTATT GTTTAAACGT
AAGCCAAAAT GGATGTTATC AGGCGAACTG GTGGAAACCA CCAAATTGTA TGCGCGCAAT
AATGCCATTA TTGATGTGAA CTGGGTCGAA GCGATCGCGC CACACTTGAT TAAACACAGT
TATACCGATC CACACTGGCA GAAAAAAGCG GGCCAAGTTG GCGCGTTTGA GTCGGTGACA
CTTTATGGGT TGCCGATTGT GAATCGTCGT CGCTGTAATT ACGGTCCGAT CAATCCAAAA
GAGGCGCGTA AGATTTTCTT GCGTCATGGT TTGGTGGAAG GGGAACTGAA TTCCAAAGTG
GCGTTCTTTG TTCATAACCA AAAAATGATT GCCGAGATTC ATCATATTGA ATCGAAATTG
CGTCGCCCGG ACTTTTTGGT GGAAGAAGAC GTGTTATATG ACTTTTATGC AAAACATATC
CCCGAGCATA TTTATAGCCT GCCGGCATTT GAAAAGTGGG TACGAAAAAC CGAAAAAACG
GATCCAGAGG CACTGAAAGC GTTGTATCTA ACGCAAGAGT TTTTGTTGAA GCAGTCGTAT
GATAGCCGTT TAGACGTTGA GTACCCCGAT CAAGTCCAAA TTAAAAATCA ACTGGACCTC
GATGTTGACT ACTTTTTTGA ACCGGGGAAA GCGCAAGATG GCATGGTGGT GAAAGTGCCT
TTGTCTGCAT TGAACCTGGT TCAGGCTGAA GATTTTGAAT GGCTGACGCC CGGGTTGCTG
AAAGAGAAAA CGGCTTTTTA CATCAAAGCG TTACCGAAGC AACTTCGCAA ACAGTTTATT
CCGGCCCCGA ATACGGCCGA ATTGGTGCTG AAAGAAATGG CCCCCAATAA AAAATTGGAC
GGACGAAAAG CCAATTATGT CACGCAACTG GTGTGGGCGT TGAATCGACG CGCTCAGCAA
AAAGTGACCA GCCATGATTT TGAAGCAGTC GAGTTACCGG AATATCTGGA ACCTTATTTT
GTGTTGCAGG ATGACAAGGG TAAAAAAATT GCTGAAAAAG CTGATTTGGA AGCTTTGAAA
ACAGAGTATC AGCATTTGGT GGATGCTCGT ATTCAAAAAC ACCAATCGAA GAAAATGCCA
GAAAACCGTA TTATTGAATC GTGGGACTTT GGGGATTTAG CCGATTCTCA AACAATTCGA
TCACAAGGAA TCGAGATGGT GGCCTATCCC GCGTTACAAG TATCTGGTGA CACAATTGAG
TTGGCATTGT TAGGCGATGA GGACTCGGCT CAAGCGCATC ATGCAGAAGC GGTCTTGGCC
TTAATCAAAA AAGAATTGGT TGAGAAAGAA AAGTATTTGC AAAAGAAACT GCCAATGCAA
AAAGCGTGTT TATGTTATGC GCCTTATGGC ACCTGCCAAG AACTGACACA ACAAGTGATT
GATCGTGCAC TGTTTCAATT GGTTCCGCAT CCGGAAAAAA TTCGGAAACA AACCGAATTT
GAAGCAATTT TGGAAACGGC ACGTTCAAAA TGGATTGAAC AGGCGCAACA GATTGCATCG
CAGGTCAATA CGATTTTGAC GGCGCATCAG AAAATTGCTA AACAAGTAAA AGGGAATGTA
AACCCTCGTT GGCTCGCTTC TGTGGCCGAT ATTCGTACCC AGCTGGACCA GCTTATCAGT
AAAGACTTTG TGCGTGTCAC ACCGGAAGAG TGGTTTAAAC AATTACCGCG TTATTTGCAA
GGCTTGGAGA AGCGTCTTGC AAAAATCGAT GTCGACCCAA GCAAAGATCA GAAAGCGATT
CGTGAGATTC AACCTATTTT GGATGCCTTT GAGACGCTGG CAAAAGAACC GGCGTACCAA
AATCACTCAG GCCTGGTCGA AATTCGCTGG CTAATTGAAG AACTGCGCCT ATCATTGTTC
GCACAACCTA TGAAGACCTT AAAACCGGTT TCAATTCAAC GGTTACAGAA AAAACTAAAA
ACGCTGTAA
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| Protein sequence | MRFYLKFECL LSASMSELID FCDKSAVIKA VDQALVKDRF FLSKQIQRFN VHANTSEADF
EALKNDQAWL KFCDRLAKSV ATVQKNQQAV PKITYDNLPV AERRDEILEL IQNNQVVVIA
GETGSGKTTQ IPKICLEAGR GVFGRIGCTQ PRRLAARSVA ERIAEELGSS LGQLVGYQVR
FHDQVHQQSL LKVMTDGILL AEIQNDPYLN QYDTIIIDEA HERSINIDFL LGILKKLLPK
RRDLKLIITS ATIDTERFAS FFEGAPIIEV SGRTYPVEVR YNPLVKIEDD EGNEFEQDIP
TAIVYALEEL SEIDPFGDVL VFQVGERDIK ETAEVLRKQN LKNTEIVPLY ARLSMAEQNK
VFQTSQKRRV ILSTNVAETS LTVPGIKFVI DPGLVRISRY SVRSKVQRLP IEKISQASAN
QRAGRCGRVS SGVCIRLYDE DDFKSRPEFT PPEIHRTSLA TVILQMTQMK LGSVKHFPFI
EPPEDKAIND GFRQLHEIGA LDEKRRLTES GRHLAKLPLD PRMAKMVLEG QKNGVLAEVL
IIAAAISIQD PRDMNESNRQ AANQAHKVFE DPRSDFLFFL NLWRFYEDKR RHLSQNKLRK
LCKTNFLSYL RMKEWHDLFF QLEMSLKRIS VKVGELHLYE EVKKGKTVTE RLSDTHSMAV
HRSLMAGLLG NIAMRDDENS YLGARNTKLF IHPSSVLFKR KPKWMLSGEL VETTKLYARN
NAIIDVNWVE AIAPHLIKHS YTDPHWQKKA GQVGAFESVT LYGLPIVNRR RCNYGPINPK
EARKIFLRHG LVEGELNSKV AFFVHNQKMI AEIHHIESKL RRPDFLVEED VLYDFYAKHI
PEHIYSLPAF EKWVRKTEKT DPEALKALYL TQEFLLKQSY DSRLDVEYPD QVQIKNQLDL
DVDYFFEPGK AQDGMVVKVP LSALNLVQAE DFEWLTPGLL KEKTAFYIKA LPKQLRKQFI
PAPNTAELVL KEMAPNKKLD GRKANYVTQL VWALNRRAQQ KVTSHDFEAV ELPEYLEPYF
VLQDDKGKKI AEKADLEALK TEYQHLVDAR IQKHQSKKMP ENRIIESWDF GDLADSQTIR
SQGIEMVAYP ALQVSGDTIE LALLGDEDSA QAHHAEAVLA LIKKELVEKE KYLQKKLPMQ
KACLCYAPYG TCQELTQQVI DRALFQLVPH PEKIRKQTEF EAILETARSK WIEQAQQIAS
QVNTILTAHQ KIAKQVKGNV NPRWLASVAD IRTQLDQLIS KDFVRVTPEE WFKQLPRYLQ
GLEKRLAKID VDPSKDQKAI REIQPILDAF ETLAKEPAYQ NHSGLVEIRW LIEELRLSLF
AQPMKTLKPV SIQRLQKKLK TL
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