| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0948 |
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| Symbol | |
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| ID | 3762045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 1022724 |
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| End bp | 1024130 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637785669 |
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| Product | ATP-dependent RNA helicase DbpA |
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| Protein accession | YP_391217 |
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| Protein GI | 78485292 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGTACCA CATCCACTTC AAGCCCTTTA GCGTTTTCAA CTCTGGGTCT TCACCCCGAT
CTTTTAAGCA ACCTAAAAAC CTTAGATTAT CATTTTTTAA CCGACATCCA GGCACAGAGT
TTACCGCCTA TTTTGGAGGG AAAAGACGTG ATTGCTCAAG GCAAAACAGG GTCAGGAAAA
ACAGCGGCGT TTGGATTGGG CGTGCTTCAA AAATTAGATG TGAAAAATTT TAACGTGCAA
GCGCTGGTGC TGTGCCCAAC GCGCGAATTG GCTGATCAAG TGGCAAATGA AATCCGACGA
TTGGCTCGTC AATTACAAAA CATTAAAGTG CTCACGTTAT GCGGTGGCAT GCCAATGGGG
CCACAAATCA GTTCGTTACA GCAAGGTGCG CATATTGTAG TGGGTACGCC GGGACGAATT
GAAGATCATC TTAAAAAAGC ACGCTTAACC TTAGCTGAAG TGAAAATATT GGTATTGGAT
GAAGCCGACC GTATGTTGGA AATGGGGTTT CAACCATCTT TGGATACGAT TATTGACCAG
CTACCACAGC AGCGCCAAAC ATTATTATTC AGCGCGACCT TTCCAAAACA AATTGAACAC
ATCAGCCAAC GCATTATGCA CCAGCCTGTT CGTGTAGAAG TGGCCTCAAG ACATGATGAC
AGCACCATTA CTCAACATTT TTATCAAGTC GACAGCACGG AACAACGGTT ACAGGCTCTA
CGACTGGTGC TGCTTCAAGC CAAACCGGAA TCCAGTGTGG TATTTTGCAA TACTAAAAAA
GAGGTTCAGA TGGTGGCCGA TACGTTACGC GACGCAGGCT TCAGCGCCTT AGCATTACAC
GGTGATTTGG AACAACGTGA TCGAGATCAA ACCTTAATCC AGTTTGCCAA CAAAAGTATT
TCGATCTTAG TGGCAACGGA TGTCGCAGCT CGCGGCTTAG ACATTGAAGC GCTTGATGCG
GTGGTGAACT TCCACTTGGC GCATGATCCG GAAGTGCATG TTCACCGTAT CGGTCGAACA
GGGCGGGCCG GCAGCCAGGG CGTGGCATGC AGTTTTATCA GTGACAAAGA AAGTTATAAA
GTTGCCACGC TGGCTGAATA CCTAGGCCAA GACATTCAAA CCGAACCATT ACCGGATGCC
AGCTTATTGA ACCAGCCGCC TTTGCAAGCC AAGATGGTGA CCTTATTAAT TGATGGTGGC
AAGAAAAACA AACTTCGCCC GGGTGATATT TTAGGGGCGT TAACAGCAAA TGACGTTCTG
AATGCTGGAC AAGTGGGTAA AATCAAAATT ACCGACAAAA AATCGTATGT CGCCGTCACT
CGGTCAATGT TCAAGCAGGC TCTCAAACAA TTGGGCGCAG GCAAACTGAA AGGCCGTAAT
TTCCGAGTGC ACAAACTCAC CCGTTAG
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| Protein sequence | MSTTSTSSPL AFSTLGLHPD LLSNLKTLDY HFLTDIQAQS LPPILEGKDV IAQGKTGSGK
TAAFGLGVLQ KLDVKNFNVQ ALVLCPTREL ADQVANEIRR LARQLQNIKV LTLCGGMPMG
PQISSLQQGA HIVVGTPGRI EDHLKKARLT LAEVKILVLD EADRMLEMGF QPSLDTIIDQ
LPQQRQTLLF SATFPKQIEH ISQRIMHQPV RVEVASRHDD STITQHFYQV DSTEQRLQAL
RLVLLQAKPE SSVVFCNTKK EVQMVADTLR DAGFSALALH GDLEQRDRDQ TLIQFANKSI
SILVATDVAA RGLDIEALDA VVNFHLAHDP EVHVHRIGRT GRAGSQGVAC SFISDKESYK
VATLAEYLGQ DIQTEPLPDA SLLNQPPLQA KMVTLLIDGG KKNKLRPGDI LGALTANDVL
NAGQVGKIKI TDKKSYVAVT RSMFKQALKQ LGAGKLKGRN FRVHKLTR
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