| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0947 |
|---|
| Symbol | |
|---|
| ID | 3762044 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | + |
|---|
| Start bp | 1021930 |
|---|
| End bp | 1022673 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637785668 |
|---|
| Product | Band 7 protein |
|---|
| Protein accession | YP_391216 |
|---|
| Protein GI | 78485291 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.13935 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCTT ATAGTGTGTA CATTGTGCTT GCAGTGGTGT TGCTGTTTTT TATCAGTGCC
ATTCGTATCT TGCGGGAATA TGAACGAGGG GTTATTTTCA TGCTGGGGCG TTTTTGGAAA
GTGAAAGGCC CGGGGTTTAT TCTGGTCATT CCCATTATCC AGCAAATGGA AAAAGTCGAT
TTACGAACCG TTGTGATGGA TGTGCCCAGT CAGGATGTGA TTTCACGAGA TAATGTGTCG
GTGCATGTTA ATGCCGTGGT TTATTTCCGG GTTATCGAAC CGGATAAGGC GATTATTCAG
GTAGAGCATT TCAATGAAGC TATCAGTCAG TTGGCGCAAA CGACTTTGAG GTCAGTTCTA
GGGCAGCATG AATTGGATGA AATGCTGTCG GAACGTGATC GATTGAATGC CGACATTCAA
ACCGTGTTGG ATCAACAAAC CGATGCCTGG GGGGTGAAGG TCAGTAATGT GGAAATCAAA
CACGTTGATT TGGATGAAAG TATGATCCGA GCGATTGCCA AACAAGCGGA AGCCGAACGA
ACACGTCGTG CCAAAGTCAT CCATGCGGAA GGGGAAATGC AAGCCTCGCA AAAATTACTT
GAAGCGGCTC AAATTTTGTC GCAGCAACCG CAAGCTTTGC AATTACGTTA TCTGCAAACC
TTAACCGAAA TCGCTAATGA TCGATCGAAT ACCATTGTCT TTCCGTTAGA GTTGATTGAA
TCGCTGTTTA ACAAAGCCAA ATAA
|
|---|
| Protein sequence | MTAYSVYIVL AVVLLFFISA IRILREYERG VIFMLGRFWK VKGPGFILVI PIIQQMEKVD
LRTVVMDVPS QDVISRDNVS VHVNAVVYFR VIEPDKAIIQ VEHFNEAISQ LAQTTLRSVL
GQHELDEMLS ERDRLNADIQ TVLDQQTDAW GVKVSNVEIK HVDLDESMIR AIAKQAEAER
TRRAKVIHAE GEMQASQKLL EAAQILSQQP QALQLRYLQT LTEIANDRSN TIVFPLELIE
SLFNKAK
|
|---|
| |