Gene Tcr_0933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0933 
Symbol 
ID3761856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1009026 
End bp1009769 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content42% 
IMG OID637785655 
Producthypothetical protein 
Protein accessionYP_391203 
Protein GI78485278 
COG category[S] Function unknown 
COG ID[COG3021] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.124497 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATAAAC CCAAGCTAAC CCCCATATCC CATTTGTTAC ACTCTGAAAA CAAAGACGTC 
CTTCCAAATT ATTTTGGTTT GTTAACATGG AATTTACACA AAGTCGATTT TTCGCACTTT
GTTCATCGCC CAATAGAACA GTTATTGCCA ATTGATCCAC CTCACCTACT GTCATTGCAA
GAAGCCACGG CCAGAGAGTC TCAACATAAA TTCTTTAATT TGCCTTTCAT TATGGCCCCC
AACATCCAAA CAAAGAAAAA GCATTTCGGT GTCCTGACCG CATCCGCTTT TGAGATGAGA
GCCCATCATC AATGCTTAAC ACAAAGCCGT GAGCTGGGCT GGATGACCCA CAAAACAGCG
TTAATTACCG AACACCCACT ACAGAATGGT GAAACCTTAA TCCATGTCAA CATTCATGCG
ATTAACTTTG TTTCCCATGG TGCCTTTCGA AAAGAACTGC AATTGATCTG GCACTTTCTG
TCGGAAAAAA AAGGCCCGAT GATACTCAGT GGCGACTTTA ATACATGGAA TAAAACACGG
GTTAAAACCC TCAATACCGC CATTAAACAA CTGAACCTGA CAGAAGTTCG CTACCCAACG
CACAAGGCGA TAAAAACCCT TAATTGGCAA CCGCTTGATT ATGTCTTTTA TCGCGGGCTC
ACGGTCGAGA AATCACAAGC TTTGGATGTC CCGGAAATTT CAGATCACAA CCCTTTAATC
GTTCATTTTT CGGTATTACC TTAA
 
Protein sequence
MYKPKLTPIS HLLHSENKDV LPNYFGLLTW NLHKVDFSHF VHRPIEQLLP IDPPHLLSLQ 
EATARESQHK FFNLPFIMAP NIQTKKKHFG VLTASAFEMR AHHQCLTQSR ELGWMTHKTA
LITEHPLQNG ETLIHVNIHA INFVSHGAFR KELQLIWHFL SEKKGPMILS GDFNTWNKTR
VKTLNTAIKQ LNLTEVRYPT HKAIKTLNWQ PLDYVFYRGL TVEKSQALDV PEISDHNPLI
VHFSVLP