Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0933 |
Symbol | |
ID | 3761856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 1009026 |
End bp | 1009769 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637785655 |
Product | hypothetical protein |
Protein accession | YP_391203 |
Protein GI | 78485278 |
COG category | [S] Function unknown |
COG ID | [COG3021] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.124497 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTATAAAC CCAAGCTAAC CCCCATATCC CATTTGTTAC ACTCTGAAAA CAAAGACGTC CTTCCAAATT ATTTTGGTTT GTTAACATGG AATTTACACA AAGTCGATTT TTCGCACTTT GTTCATCGCC CAATAGAACA GTTATTGCCA ATTGATCCAC CTCACCTACT GTCATTGCAA GAAGCCACGG CCAGAGAGTC TCAACATAAA TTCTTTAATT TGCCTTTCAT TATGGCCCCC AACATCCAAA CAAAGAAAAA GCATTTCGGT GTCCTGACCG CATCCGCTTT TGAGATGAGA GCCCATCATC AATGCTTAAC ACAAAGCCGT GAGCTGGGCT GGATGACCCA CAAAACAGCG TTAATTACCG AACACCCACT ACAGAATGGT GAAACCTTAA TCCATGTCAA CATTCATGCG ATTAACTTTG TTTCCCATGG TGCCTTTCGA AAAGAACTGC AATTGATCTG GCACTTTCTG TCGGAAAAAA AAGGCCCGAT GATACTCAGT GGCGACTTTA ATACATGGAA TAAAACACGG GTTAAAACCC TCAATACCGC CATTAAACAA CTGAACCTGA CAGAAGTTCG CTACCCAACG CACAAGGCGA TAAAAACCCT TAATTGGCAA CCGCTTGATT ATGTCTTTTA TCGCGGGCTC ACGGTCGAGA AATCACAAGC TTTGGATGTC CCGGAAATTT CAGATCACAA CCCTTTAATC GTTCATTTTT CGGTATTACC TTAA
|
Protein sequence | MYKPKLTPIS HLLHSENKDV LPNYFGLLTW NLHKVDFSHF VHRPIEQLLP IDPPHLLSLQ EATARESQHK FFNLPFIMAP NIQTKKKHFG VLTASAFEMR AHHQCLTQSR ELGWMTHKTA LITEHPLQNG ETLIHVNIHA INFVSHGAFR KELQLIWHFL SEKKGPMILS GDFNTWNKTR VKTLNTAIKQ LNLTEVRYPT HKAIKTLNWQ PLDYVFYRGL TVEKSQALDV PEISDHNPLI VHFSVLP
|
| |