Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0930 |
Symbol | |
ID | 3761853 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 1006833 |
End bp | 1007528 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637785652 |
Product | DNA polymerase III, epsilon subunit |
Protein accession | YP_391200 |
Protein GI | 78485275 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family [TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCCAAA TATTGCTAGA TACGGAAACA ACCGGTTTTG ACCCGAAAAA CGGCGATAAG ATTATTGAAA TCGGAGCGGT TGAACTCATC AAGCGCAAAC TGACCCATAA CAACTATCAT CAATACATCC AGCCAGAAAG AGACGTTCCC ATCGATGCCA TTGAGGTACA CGGAATCACC AACGAATTCC TGGTTGGAAA ACCGATCTTT GCTGACGTAG TCGATGACTT TATGGAATAT GTCGCAGGGG CTGAGCTTAT CATCCACAAC GCCCCTTTTG ATGTCGGGTT CATCAATCAA GAACTGTCAC AGCTTCCCAA TAACAAATGG GGAAAAATTG AAGACCACTG TACCATTACC GACAGTTTGA AAATGGCACG TAAAGCGTAC CCCGGACAAC GCAATTCATT AGATGCGCTG TGCAAACGAT TTTTAATCGA CAATTCAAAC CGTACACTTC ACGGCGCCCT ACTCGATTCG GAAATCCTTG CGGATGTCTA TCTTGCCATG ACGGGCGGAC AAACGGCTTT GATTCTGGCG GATGAAGAAG GCAGTTCAAG TGACGCCTCC CGTGTAAATT TAAACACTCA GCGTGCTCCA CTCAAAGTAC TGAAAGCTTC CGCTGAAGAA CTGGCGGCCC ATAATGGGAA GTTACAACAA ATCAGTGAAA AATGCGGCGA CACCATCACC TGGTAA
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Protein sequence | MRQILLDTET TGFDPKNGDK IIEIGAVELI KRKLTHNNYH QYIQPERDVP IDAIEVHGIT NEFLVGKPIF ADVVDDFMEY VAGAELIIHN APFDVGFINQ ELSQLPNNKW GKIEDHCTIT DSLKMARKAY PGQRNSLDAL CKRFLIDNSN RTLHGALLDS EILADVYLAM TGGQTALILA DEEGSSSDAS RVNLNTQRAP LKVLKASAEE LAAHNGKLQQ ISEKCGDTIT W
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