Gene Tcr_0930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0930 
Symbol 
ID3761853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1006833 
End bp1007528 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content46% 
IMG OID637785652 
ProductDNA polymerase III, epsilon subunit 
Protein accessionYP_391200 
Protein GI78485275 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID[TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCAAA TATTGCTAGA TACGGAAACA ACCGGTTTTG ACCCGAAAAA CGGCGATAAG 
ATTATTGAAA TCGGAGCGGT TGAACTCATC AAGCGCAAAC TGACCCATAA CAACTATCAT
CAATACATCC AGCCAGAAAG AGACGTTCCC ATCGATGCCA TTGAGGTACA CGGAATCACC
AACGAATTCC TGGTTGGAAA ACCGATCTTT GCTGACGTAG TCGATGACTT TATGGAATAT
GTCGCAGGGG CTGAGCTTAT CATCCACAAC GCCCCTTTTG ATGTCGGGTT CATCAATCAA
GAACTGTCAC AGCTTCCCAA TAACAAATGG GGAAAAATTG AAGACCACTG TACCATTACC
GACAGTTTGA AAATGGCACG TAAAGCGTAC CCCGGACAAC GCAATTCATT AGATGCGCTG
TGCAAACGAT TTTTAATCGA CAATTCAAAC CGTACACTTC ACGGCGCCCT ACTCGATTCG
GAAATCCTTG CGGATGTCTA TCTTGCCATG ACGGGCGGAC AAACGGCTTT GATTCTGGCG
GATGAAGAAG GCAGTTCAAG TGACGCCTCC CGTGTAAATT TAAACACTCA GCGTGCTCCA
CTCAAAGTAC TGAAAGCTTC CGCTGAAGAA CTGGCGGCCC ATAATGGGAA GTTACAACAA
ATCAGTGAAA AATGCGGCGA CACCATCACC TGGTAA
 
Protein sequence
MRQILLDTET TGFDPKNGDK IIEIGAVELI KRKLTHNNYH QYIQPERDVP IDAIEVHGIT 
NEFLVGKPIF ADVVDDFMEY VAGAELIIHN APFDVGFINQ ELSQLPNNKW GKIEDHCTIT
DSLKMARKAY PGQRNSLDAL CKRFLIDNSN RTLHGALLDS EILADVYLAM TGGQTALILA
DEEGSSSDAS RVNLNTQRAP LKVLKASAEE LAAHNGKLQQ ISEKCGDTIT W