| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0924 |
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| Symbol | |
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| ID | 3761847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 1000465 |
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| End bp | 1002456 |
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| Gene Length | 1992 bp |
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| Protein Length | 663 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637785646 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_391194 |
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| Protein GI | 78485269 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATTTTG CAACGAGAAC ACCCAAACTT CTATTTCTTT TTTTTATAAC ACTCAGCGTA
ACATTCCAAC AGGGTCATGC GGCCATCGAC CCTGAAAGCC TGTCCGATAA TCAAAAAACG
TTTCTCGATG CCTATGAGGC GATCAAAGCC AATGATCGCC CTTTAATCTC AAAATATAAA
TCCCAACTTA AAAATTACCC TCTCTACCCA TATTTGATTT ATCTGGATTA TAAGTATCAT
TTTAAAGATA CGCCTAACGC CGTAATCGAA TCGTTTATAA ACAACCACCC CAATAGTCCG
TTGCCCTTTT TTTTAAAAAC AAAGTGGTTA CACCATCTCG CCGAGACTTA TCAATGGGAT
GAATACCTCA AGCACTACCA AGAAGGTGAG TATCGCTCCG TATCATTGAC GTGCTATTTT
ATACAAGCCA GCATTGCTCG TAATCGAGCC GATCAAATTC GAAGCAAAGC GCAGATTCTT
TGGAAAACAC ACGTTACGTT ACCGAAAGAC TGTCGACCGG TTAAACGCTT CCTGAGAAAA
GAAAAACTGA TTACGGGTTC AATGGTTTGG TCAAAGGTTC GACTGGCAAT GGAAAAGGGA
AAAACTCACC AGGCCAAAAA AATTGGACGC GATTTATCCA AAATGGGACG TCGTGCATTA
AACTTTTGGA TTGAAACGTA TGAAATGCCT AAAAAAGTAA CGCGAGCTAT TCCAGCCTAT
ATTTCGCCTG TCATTCGTCA AGAAATTTTC AAACAGGGAA TACAACGGCT GGCTTATTCC
GATCCAGAAT TGGCATTAAA AACGCTGGAT AGACGTGCCG AACAGTACGG TTTAAATACA
CAAGAGTTAG CCGACCTACA AAGCCAAATC AGTCTGCGCT TTGCTTATCA ATACCACCCC
AAAGCCAGCG AATATTTGGC TCAAATTGAT CGTGCCAGTA AAAATGAAAA AACATTAGAC
TGGGAACTTC AAGTAACCAT TCGGGAATCA AACTGGGTGA ATTATTTGGA CCTCTATGCC
TTATTGCCCG AAAAGCAGCA GAAAGAGACA CGTTGGCGCT ATTGGAAAGC ACGTGCATTA
TCGGAACTTA ATCAAAATAA AAAGGCCCTG CCGATTTTTA AAGCGCTGGC TAAAAAACGA
AATTTTTATG GCTTCATGTC CGCCGATCGT TTAAACCAGC CTTACCAATT CAACCCGACA
CCAAGCCAGA AAAAAAGCTT AACCAAAATG GCCGAAAAGT ACCCTCAACT TAAGGTGATC
CAAGAGCTGA TTGCAATCAA TTGGAAATTA AGTTTAAAAC GAGAGTGGTA CCATTTGCTC
GACCATATTG ACGAGGATGA CTTTGAAGCC ATTGCAAACT TCATGTCCGA CTGGAACCAA
CATAATTTAG CCATTCAAAC CATTTCAAAA GTCAAAAAAT GGGATGATTT ATCGTTACGC
TTCCCAACCC CTTATAAGCA ACCTGTTTTA CAGGCGGCCA ACAAAAACAC CATTGATCCA
GCCTGGGTAT ATGGCGTGAT TCGCCGTGAA AGTGCTTTTT CTCCCAACAT CAGCTCTGCG
GTTGGTGCGG TGGGATTAAT GCAATTAATG CCGAAAACGG CGCGCTATAT CGGCCGAAAA
ATGGGCTTCA ATAAGCGACA ATACACGCGC TTAACCAGCC CGGAATCCAA CATCAAACTG
GGCAGCGCTT ATTTAAGTTA TCTGCATAAA AAATATAATG GCAGTCGCAT CTTAGCCACA
GCGGCCTATA ATGCAGGTCC ACATCGTGTG GATCAGTGGA TTCCTAAAGA CACCTTGATG
GCGGCCGATC AATGGATTGA AACAATCCCC TTCTCAGAGA CGCGCGCTTA TGTCAAAGCG
GTTCTAGAAT ACACTACAAT TTTTAAATCC ATGCTGAATA AAAAGTATGA TCGTTTGGAA
AATTTTATGC ATCCGATTGG ATTACCGAAA ACTCTGTCTG CACACGAGAC AGGCGATTCC
CCTCATTCTT AA
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| Protein sequence | MHFATRTPKL LFLFFITLSV TFQQGHAAID PESLSDNQKT FLDAYEAIKA NDRPLISKYK
SQLKNYPLYP YLIYLDYKYH FKDTPNAVIE SFINNHPNSP LPFFLKTKWL HHLAETYQWD
EYLKHYQEGE YRSVSLTCYF IQASIARNRA DQIRSKAQIL WKTHVTLPKD CRPVKRFLRK
EKLITGSMVW SKVRLAMEKG KTHQAKKIGR DLSKMGRRAL NFWIETYEMP KKVTRAIPAY
ISPVIRQEIF KQGIQRLAYS DPELALKTLD RRAEQYGLNT QELADLQSQI SLRFAYQYHP
KASEYLAQID RASKNEKTLD WELQVTIRES NWVNYLDLYA LLPEKQQKET RWRYWKARAL
SELNQNKKAL PIFKALAKKR NFYGFMSADR LNQPYQFNPT PSQKKSLTKM AEKYPQLKVI
QELIAINWKL SLKREWYHLL DHIDEDDFEA IANFMSDWNQ HNLAIQTISK VKKWDDLSLR
FPTPYKQPVL QAANKNTIDP AWVYGVIRRE SAFSPNISSA VGAVGLMQLM PKTARYIGRK
MGFNKRQYTR LTSPESNIKL GSAYLSYLHK KYNGSRILAT AAYNAGPHRV DQWIPKDTLM
AADQWIETIP FSETRAYVKA VLEYTTIFKS MLNKKYDRLE NFMHPIGLPK TLSAHETGDS
PHS
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