Gene Tcr_0922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0922 
Symbol 
ID3761845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp997209 
End bp998888 
Gene Length1680 bp 
Protein Length559 aa 
Translation table11 
GC content44% 
IMG OID637785644 
Productglutaminyl-tRNA synthetase 
Protein accessionYP_391192 
Protein GI78485267 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0008] Glutamyl- and glutaminyl-tRNA synthetases 
TIGRFAM ID[TIGR00440] glutaminyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCAAA ACACGACAGT TGCAGTTGAT AAACCGACAA ACTTCATCCG AAACATCATT 
GATGAAGATC TTGCCACGCA CAAATACAAC ACCGTTCATA CGCGTTTCCC GCCAGAACCC
AATGGTTACT TACATATTGG GCATGCGAAG TCGATTTGTT TGAATTTTGG CTTGGCTGAA
GATTACCACG GCGGCTGTAA TTTACGGTTT GATGATACCA ATCCGGCGAA AGAAGACGTG
GAATATGTCG AGGCGATTAA ACAGGATGTG GCCTGGTTAG GGTTTAAATG GGCTGGAGAG
CCGTGTTATT CCTCTAATTA TTTCCAGCAG TTTCACGATT ATGCTGTTGA GTTAATTAGC
AAAGGCTTGG CGTATGTGTG TTTTTTGAAT GCCGAAGAAA CGCGTGCTTA TCGAGGAACA
TTAACCGAAC CAGGTAAAGA CAGCCCGTAT CGTGAAACGT CGGTGGAAGA AAATCTTGCG
TTGTTTGCCA AAATGAAAAA CGGTGAATTT AAAGAGGGCG AGTGTGTCTT ACGTGCAAAG
ATTGATATGG CGTCGTCTTT TATGTGTATG CGTGATCCGA CACTTTATCG TGTGCGCTAC
GCGGAGCACC ACCAGACAGG CAATGCTTGG TGTATTTATC CGATGTATGA CTTTGCGCAT
TGTATTTCCG ATGCCATAGA AGGTGTGACG CATTCTCTTT GTACGTTAGA GTTTCAAGAT
AATCGCCGTT TATACGATTG GGTTTTAGAG CATTTAAATG ATTTCAATAA ACCGGATCGT
CCATTTCAAT ATGAATTTTC ACGCTTAAAT CTTGAATACA CCGTCATGTC AAAACGTAAG
TTGCATCAGT TGGTAGAAGA TCAATTGGTG TTAGGTTGGA ATGATCCGCG TATGCCGACT
ATTTCAGGCC TACGCCGACG TGGAGTGACG CCTGCTGCGA TTCGGGACTT TGCGGATCGT
ATTGGTATTT CAAAAGTGGA CAGCATGACC GAGATGGGCA TTCTGGAAGC CGCCATTCGA
GACGATTTAA ATGTGGTGGC GCCTAGAACC ATGGGCGTCA TAGACCCGAT TAAACTGGTG
ATTGAAAATT ATCCTGAAAA TGAAGTGGAA TCCATCAATG CACCAGTACA TCCGCAGAAT
GAAGCCATGG GCAAACGCGA AATTTTCTTT GGCAAAGAGT TGTATATCGA CCGTGCTGAT
TTTGTTGAAG AAGCGCCGAA CCGAAAATGG CAGCGACTGG CGTTAGACAA GGAAGTGCGG
TTGCGTAATG CGTATATTGT TAAGGCCGAG CGTGTGGAAA CGGATGCGCA AGGCAATGTC
ACCACGGTTT ACTGTTCTTA CGATCCAGAC ACATTAGGGA AAAATCCTGC GGATGGTCGT
AAAGTAAAAG GGGTGATTCA TTTTGTGGAA GCTTCAAAAG CATTGCCGGC TGAATTCAGA
CTTTATGATC GTTTGTTTAC AGTGCCTAAT CCGGCCAAAG AAGACGATTT TGAAGCGGTG
ATTAACCCTG ATTCCTTAAT TATTAAACAA GGCTTTGTTG AACCGTCAAT GCAATCTGCG
GAAAAAGAAA CCGCCTATCA GTTTGAACGC GAAGGTTATT TCTGCCGTGA TAGCGAATCG
GATGAAGTCC TTATTTTTAA TAAAACGGTC GGATTAAGAG ATACTTGGAG CCAAAAGTAA
 
Protein sequence
MSQNTTVAVD KPTNFIRNII DEDLATHKYN TVHTRFPPEP NGYLHIGHAK SICLNFGLAE 
DYHGGCNLRF DDTNPAKEDV EYVEAIKQDV AWLGFKWAGE PCYSSNYFQQ FHDYAVELIS
KGLAYVCFLN AEETRAYRGT LTEPGKDSPY RETSVEENLA LFAKMKNGEF KEGECVLRAK
IDMASSFMCM RDPTLYRVRY AEHHQTGNAW CIYPMYDFAH CISDAIEGVT HSLCTLEFQD
NRRLYDWVLE HLNDFNKPDR PFQYEFSRLN LEYTVMSKRK LHQLVEDQLV LGWNDPRMPT
ISGLRRRGVT PAAIRDFADR IGISKVDSMT EMGILEAAIR DDLNVVAPRT MGVIDPIKLV
IENYPENEVE SINAPVHPQN EAMGKREIFF GKELYIDRAD FVEEAPNRKW QRLALDKEVR
LRNAYIVKAE RVETDAQGNV TTVYCSYDPD TLGKNPADGR KVKGVIHFVE ASKALPAEFR
LYDRLFTVPN PAKEDDFEAV INPDSLIIKQ GFVEPSMQSA EKETAYQFER EGYFCRDSES
DEVLIFNKTV GLRDTWSQK