Gene Tcr_0921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0921 
Symbol 
ID3760466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp996335 
End bp996910 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content42% 
IMG OID637785643 
Productpeptidylprolyl isomerase 
Protein accessionYP_391191 
Protein GI78485266 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAGAA GATTGGCATT CATCACTTTA TTTTTAAGTT TTTTCAGCAT CAATAGTTTG 
GCCGCAGATA AAAACAACCC ACAGGTTCTC ATTCAAACCA ACATGGGCAA TATTGTTATT
GAACTTTACC CGGATAAAGC GCCTGAAACC GTCGAAAATT TTCTGCGTTA TGTGAATGAA
GGCTTTTATG ATGGCACCAT TTTTCATCGC GTCATTCCAA ACTTCATGAT ACAAGGTGGT
GGCTTCACGC CTGACATGAC CAAAAAGCTC ACCCATAACC CTATTCATAA CGAAGCGGAC
AATGGCCTTA GAAACCGCAT TGGAACGGTT GCCATGGCGC GAACGAATGA CCCACATTCA
GCCTCTTCAC AGTTTTTTAT TAATGTGGCG CAAAATACCT TTTTGGATTT CAGAGAAAAA
ACACCGCGCG CATATGGTTA CGCTGTTTTT GGGCGAGTGA TCAAAGGCAT GAAAGTCGTC
AATCACATTC GTAACGTCAA AACAGGCTTT CACAATGGCA TGGGCGATGT GCCAGTCAAC
TCAGTGGTCA TGACAAAAGT TACTCAAATC AAATAA
 
Protein sequence
MTRRLAFITL FLSFFSINSL AADKNNPQVL IQTNMGNIVI ELYPDKAPET VENFLRYVNE 
GFYDGTIFHR VIPNFMIQGG GFTPDMTKKL THNPIHNEAD NGLRNRIGTV AMARTNDPHS
ASSQFFINVA QNTFLDFREK TPRAYGYAVF GRVIKGMKVV NHIRNVKTGF HNGMGDVPVN
SVVMTKVTQI K