| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0915 |
|---|
| Symbol | |
|---|
| ID | 3760460 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | + |
|---|
| Start bp | 992175 |
|---|
| End bp | 992678 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637785637 |
|---|
| Product | phosphatidylglycerophosphatase A |
|---|
| Protein accession | YP_391185 |
|---|
| Protein GI | 78485260 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1267] Phosphatidylglycerophosphatase A and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.000968803 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAACCC CTAAGTCAGC TATAAAAACT CCCACCTTTA CAATGATTAT TCGTCACCCG
GTGATGTTTT TAGGGTTTGG GTTTGGGTCG GGTTTAATCG CCAAAGGACC TGGAACACTT
GGCACGTTGG TCGGGATGTT GGTGTTTATT CCTATCTTAT TATGGAGTGA ACTCGCTGCA
TGGGGACTTT TTCTGTTCAG TTTGATAGTG GGAAGTTATA TTTGCGGTGA GTCAGCCCGC
CAAATTGGTG TGCACGATCA TGGCGGTATC GTCTGGGATG AGTTTGCCGG TGTCTGGTTG
GTCATTCTAT TACTGCCTGT GCAAAGCTGG TTTTATTGGG GGCTCGCTTT TGTTTTGTTT
AGACTATTTG ATATTGCAAA GCCATGGCCT ATTAATTGGG CCGATCAAAA AGTAGCGGGT
GGAACCGGAA TTATGTTGGA TGACATAATT GCTGCTTGTT ACGCCATAAT TATTATTTGG
GCTTTGCAAA CTGGTTTTTT ATAG
|
|---|
| Protein sequence | MPTPKSAIKT PTFTMIIRHP VMFLGFGFGS GLIAKGPGTL GTLVGMLVFI PILLWSELAA
WGLFLFSLIV GSYICGESAR QIGVHDHGGI VWDEFAGVWL VILLLPVQSW FYWGLAFVLF
RLFDIAKPWP INWADQKVAG GTGIMLDDII AACYAIIIIW ALQTGFL
|
|---|
| |