Gene Tcr_0904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0904 
Symbol 
ID3760449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand+ 
Start bp982078 
End bp982734 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content43% 
IMG OID637785626 
ProductIron dependent repressor 
Protein accessionYP_391174 
Protein GI78485249 
COG category[K] Transcription 
COG ID[COG1321] Mn-dependent transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0000581778 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAGTA AGGCACTTGA AGATTATCTT AAAATTATTT ATAAGCTGGA AGAAGAGAAC 
GAATCTGATA AAGGTGTCAG CACTTCTGCA ATCGCTGAAA GATTAGCCAT TTCACAAGCA 
TCGGTCTCGA ATATGCTTAA AAAGCTGGCC GATAAGAAAA TGATCCAGTA TGAACCTTAT 
TATGGTGTTT CATTAACCGC TAAAGGCCGA AAAGTGGCTT TGAATATGAT TCGACGACAT 
CGTATTCTGG AACTCTTCTT AGTTGAGCGA CTGGGGTATC AGTGGGATGA AGTGGATGAA 
GAAGCTGAAA TTTTGGAGCA CGCGGTTTCA GATAAGTTAG CCAATAGGAT GTGGGAAGAG 
CTGGGGCAAC CTACTCAAGA CCCGCATGGC TCTCCAATTC CTAACGAAAA AGGGGAGATG 
GTGCAACCCA AAATGGCCAG CCTTGCTGAA ATAGAGGCGC CTGCTAAAGC CAAAGTGGTG 
CGAATTCAAA ACCGTTCACC AGAAGAATTG CGCTATCTAT TTTCAATCGG CTTAGTGAAG 
GATGCGGGGG TTATTATTCA TCAGAAAGCC CCTTTTGAAG GCCCTTTGTC GATTGAAATA 
AATGGTGAGC AGCATGCATT GGATTATCGG CTAGCACAAT CGATATTTGT TGCCTAA
 
Protein sequence
MASKALEDYL KIIYKLEEEN ESDKGVSTSA IAERLAISQA SVSNMLKKLA DKKMIQYEPY 
YGVSLTAKGR KVALNMIRRH RILELFLVER LGYQWDEVDE EAEILEHAVS DKLANRMWEE 
LGQPTQDPHG SPIPNEKGEM VQPKMASLAE IEAPAKAKVV RIQNRSPEEL RYLFSIGLVK 
DAGVIIHQKA PFEGPLSIEI NGEQHALDYR LAQSIFVA