| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0900 |
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| Symbol | |
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| ID | 3761371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 978908 |
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| End bp | 979717 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637785620 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_391170 |
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| Protein GI | 78485245 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1729] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR02795] tol-pal system protein YbgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000000011862 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAAGA CGTTTTTCTT GGTCATTACA GCCGCAATAT TAAACAGTGT TATGCCTTTG
GCAAATGCCG CACCTCAATC GATAGAAGAC CGTGTTGAAA GGCTCGAAAG AATGGCAAAT
AACCCTGTTC TCATTCAACT GAGCCGGCGT TTGGCAGAAC AGCAACGCCA AATTCAAAGC
TTATATGATG AAGTGGACCG TTTAAATTAC CAGTTAAAGC AAACTCAGGA CAAACTGGCT
AAACAGTATA AAGAAGCGGA TGAGCGTTTG AGTGTGCTTG AAACGTCACG AACTTCTACT
GCCGAAACAC AAGAAGGGTC GTCTTCATCG GTTCTTGTGC CAGAAGGAAC CTCTGGGGGG
ACGCAAAGTA AAGCCGTTAG TGCTCAGCCA TCTTCTGCTG CTACAGGTGT GACGACGCAT
GCGGCTACGG CCAAAGAAAA ACGTGCCTAT GAAGCGGCTT TTGCTTTAAT GAAAAAATCG
GATTATCAAG GTGCCAGTAA AGCGTTTTCG GCATTTAAGG CCACCTATCC TCACAGTGAC
TTAGCCAGCA ATTCAGCTTA TTGGGAAGGC GAGGCGGAAG CTGTTTTAGG GAATGATAAA
GCCGCTTTAA AAGCCTTTGT TGATGTGTAT GAAACTTACC CAACTTCGCT AAAAGCTCCT
GCAGCTATGC TAAGAGCTGC AGATATGTAT GATGATTTGG GTGACAAAAA GAAAGCGAAA
ACGTTATACG AAAAATTGAT TCAAGATTAC CCTAAAAAAA ATGTGGCGGA AAAGGCCCGT
AAAAGACTCT CGGCAATGGG AGTTAAATAG
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| Protein sequence | MKKTFFLVIT AAILNSVMPL ANAAPQSIED RVERLERMAN NPVLIQLSRR LAEQQRQIQS
LYDEVDRLNY QLKQTQDKLA KQYKEADERL SVLETSRTST AETQEGSSSS VLVPEGTSGG
TQSKAVSAQP SSAATGVTTH AATAKEKRAY EAAFALMKKS DYQGASKAFS AFKATYPHSD
LASNSAYWEG EAEAVLGNDK AALKAFVDVY ETYPTSLKAP AAMLRAADMY DDLGDKKKAK
TLYEKLIQDY PKKNVAEKAR KRLSAMGVK
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