Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0899 |
Symbol | |
ID | 3761370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 978273 |
End bp | 978890 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637785619 |
Product | OmpA/MotB |
Protein accession | YP_391169 |
Protein GI | 78485244 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | [TIGR02802] peptidoglycan-associated lipoprotein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000000025431 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATAAAT TAAAGTTGTT GGTTGCTCTG GGAGTTGTTT CGACATTAGC TGCCTGTACC AGTGCCCCGA AGAAAGGGGA AAATGCAGAT ATGAATGTTG AACCTGTATC ACAGGAAGAA ATGGATTATG CCGAGAAAGC ACGGTTAGAG CTGGAAAAGG CCAATTCCGG AGAGGTGAAT GAAGTTGAAG TGCTTGGTGC AGGCGCGACT GGATCTGATG TAAGCAGCGA ATCCTTAGCC AGCCAGGATC TTAATGCTAT GAGTCAGGAC GTGCCTGCAC TGGGTCAAAC ATTTGAACCT GTGATCTATT TTGACTATGA TCAATACATC GTCGACGACA CCTCGTTAGA GACTGTTAAA CACTATGCCA CTATTTTGAT TGATAATCCG TCTGAAAAAA TTCAGTTAGT TGGCCACACG GATGAAAGAG GCACGCCGGA ATATAATTTA GCTTTGGGCG AAAAACGAGC CAAAGCCGTA GCAGAAGCCT TTATGCTTTA TGGAGTGCAT AAAGATCGTA TTGAAGTGAT CTCATTAGGG GAAGAACTTC CTGTGATGGA AGGGCATAAT GAAGAAGCTT GGGCAAAGAA TCGTCGTGTC GAAATTAAAG CACAATAA
|
Protein sequence | MNKLKLLVAL GVVSTLAACT SAPKKGENAD MNVEPVSQEE MDYAEKARLE LEKANSGEVN EVEVLGAGAT GSDVSSESLA SQDLNAMSQD VPALGQTFEP VIYFDYDQYI VDDTSLETVK HYATILIDNP SEKIQLVGHT DERGTPEYNL ALGEKRAKAV AEAFMLYGVH KDRIEVISLG EELPVMEGHN EEAWAKNRRV EIKAQ
|
| |