Gene Tcr_0899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0899 
Symbol 
ID3761370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp978273 
End bp978890 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content44% 
IMG OID637785619 
ProductOmpA/MotB 
Protein accessionYP_391169 
Protein GI78485244 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID[TIGR02802] peptidoglycan-associated lipoprotein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000025431 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAT TAAAGTTGTT GGTTGCTCTG GGAGTTGTTT CGACATTAGC TGCCTGTACC 
AGTGCCCCGA AGAAAGGGGA AAATGCAGAT ATGAATGTTG AACCTGTATC ACAGGAAGAA
ATGGATTATG CCGAGAAAGC ACGGTTAGAG CTGGAAAAGG CCAATTCCGG AGAGGTGAAT
GAAGTTGAAG TGCTTGGTGC AGGCGCGACT GGATCTGATG TAAGCAGCGA ATCCTTAGCC
AGCCAGGATC TTAATGCTAT GAGTCAGGAC GTGCCTGCAC TGGGTCAAAC ATTTGAACCT
GTGATCTATT TTGACTATGA TCAATACATC GTCGACGACA CCTCGTTAGA GACTGTTAAA
CACTATGCCA CTATTTTGAT TGATAATCCG TCTGAAAAAA TTCAGTTAGT TGGCCACACG
GATGAAAGAG GCACGCCGGA ATATAATTTA GCTTTGGGCG AAAAACGAGC CAAAGCCGTA
GCAGAAGCCT TTATGCTTTA TGGAGTGCAT AAAGATCGTA TTGAAGTGAT CTCATTAGGG
GAAGAACTTC CTGTGATGGA AGGGCATAAT GAAGAAGCTT GGGCAAAGAA TCGTCGTGTC
GAAATTAAAG CACAATAA
 
Protein sequence
MNKLKLLVAL GVVSTLAACT SAPKKGENAD MNVEPVSQEE MDYAEKARLE LEKANSGEVN 
EVEVLGAGAT GSDVSSESLA SQDLNAMSQD VPALGQTFEP VIYFDYDQYI VDDTSLETVK
HYATILIDNP SEKIQLVGHT DERGTPEYNL ALGEKRAKAV AEAFMLYGVH KDRIEVISLG
EELPVMEGHN EEAWAKNRRV EIKAQ