| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0898 |
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| Symbol | |
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| ID | 3761369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 976917 |
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| End bp | 978215 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637785618 |
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| Product | TolB-like |
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| Protein accession | YP_391168 |
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| Protein GI | 78485243 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000000336659 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAG TTATTTACAC CATAGTCGGT TTTGTCTTTA TGTGGAGTAC GTCAGTTTAT
GCTGATTTAA CCATTCAAAT TGATCAGAGT TCTGATAATG CCGTGCCGAT CGCACTGGTG
CCTTTCGAAT GGAAAGGTGC GCAGTTGCAT CCGCCTCAAA ACATCACCAG CATTGTTGGT
AATGACTTAT TACGCAGCGG TAAATTTAAA GCGGTGGACG AAGCGAAACT GCCTTCTCGC
CCTAAAACAT TGGACGACAT TGATTTTTAC CAGTGGAAGC AGCTAGGGGT CGATAATTTG
TTGATGGGAC GAATTACCGA AGAGGCAAAT GGGACGTACC AGATTGAGAT GCGTTTTGTG
GATTTGTTGC GTAAAGAGCA AGTCATTGGA AAACGATGGT CGGGTATTTC CAAGTCACTG
TTACGACAGG TTGCTCACAA AATGAGTGAT TTGATTTATG AAGAGTTAAC CGGGATTCGA
GGTGCTTTTA ACACCCGAAT GGCTTATGTC ACCGTTCGCA ATGTGAAAGG CAAGAAACAA
TACAGTCTTG AAGTGGCGGA TTCAGATGGT TATAACTCTC AACCTATTTT ACGCTCTAGT
TTGCCGATTA TGTCACCGAG CTGGTCACCT GATGGGCAAC ACTTAGCGTA TGTTTCATTT
GAAAATGGAC GTTCCCAGAT TGTGTTGCAA AGTTTGGATG GCAAAAGCCG ACAAATCATT
GCTAAATTTA AAGGGATTAA CGGGGCTCCC GCTTGGTCAC CCGATGGCAA AAAACTGGCA
TTGACGTTGT CTAAAGATGG TTCGGCGGAT GTTTATATTA TGGATATGAA AACCCGTAAA
CTCCGTCGAT TGACTCGTAA TTGGGCTATT GAAACAGAGG CTGTCTGGGC ACCGAACGGG
CATTCTTTGT TTTTTAACTC AGATCGACGC GGTCAGCCAC AGATTTTTCA AGTGTTTTTA
GACACTGGAG AGATGCGTCG TATTTCTTAT GTGGGTCGTT ATAATGCCAA CCCTGCAATT
TCTCCTGACG GACGTTATGT GGCCATGGTG CATGCCAATG GTGGATTCCA TATTGCTGTA
TTGGATTTAT ATAATGAAGA CTTTAATATC TTAACCAAAA CGTATTTGGA TGAATCGCCA
ACCTTCTCGC CGAATGGTGA AATGATTTTA TATGCAATGA ACCAAGGTGG CCAAGGTAAG
TTAGCGGTTG TTTCTGTGAA TAGTAATGTC ACACAGATTT TAAGTGTTCA AGAAGGAGAG
GTTCGCTCAC CTTCTTGGGG ACCTTATTTA CCTCGTTAG
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| Protein sequence | MKKVIYTIVG FVFMWSTSVY ADLTIQIDQS SDNAVPIALV PFEWKGAQLH PPQNITSIVG
NDLLRSGKFK AVDEAKLPSR PKTLDDIDFY QWKQLGVDNL LMGRITEEAN GTYQIEMRFV
DLLRKEQVIG KRWSGISKSL LRQVAHKMSD LIYEELTGIR GAFNTRMAYV TVRNVKGKKQ
YSLEVADSDG YNSQPILRSS LPIMSPSWSP DGQHLAYVSF ENGRSQIVLQ SLDGKSRQII
AKFKGINGAP AWSPDGKKLA LTLSKDGSAD VYIMDMKTRK LRRLTRNWAI ETEAVWAPNG
HSLFFNSDRR GQPQIFQVFL DTGEMRRISY VGRYNANPAI SPDGRYVAMV HANGGFHIAV
LDLYNEDFNI LTKTYLDESP TFSPNGEMIL YAMNQGGQGK LAVVSVNSNV TQILSVQEGE
VRSPSWGPYL PR
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