Gene Tcr_0896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0896 
Symbol 
ID3761367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand+ 
Start bp975401 
End bp975856 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content43% 
IMG OID637785616 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_391166 
Protein GI78485241 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00000238629 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCAGA GTTCTTTCCG ATCGCAGCAT AAAAAGCGCC TTATGGCAGA AATCAACGTT 
GTGCCTTATA TCGATGTCAC ATTGATTTTG TTAATTATTT TTATGATCAC CGCTCCGATT 
GTGCAACAAG CGGTGACGGT TGAGTTACCT CAAACGCCCC GTATTCAAGA CAAACAAAAA 
ACAACGGCTG TGAAACCCGC AAAACCGTTT GTCATTAGCG TGACCGCCGA GGGGTTTTAT 
AAAACGTCTG AAGATCCCGA CAGAGTATTG GGTCAAAAAG ATTTATCAGG GTTGGTAGCC 
GAAGTTGTAG CTCGTTCCCA GCTCAAACCC AATCAACCGT TTTATATCCA AGGTGATCGT 
CAGACACCGT ATGGAAAAGT GGTTCATTTA TTCGTTTTAC TTAAAGCAAA TGGCGTCAGT 
CAGGTTTCAT TGATGACGGA GCCAGAAGAG AAATAA
 
Protein sequence
MMQSSFRSQH KKRLMAEINV VPYIDVTLIL LIIFMITAPI VQQAVTVELP QTPRIQDKQK 
TTAVKPAKPF VISVTAEGFY KTSEDPDRVL GQKDLSGLVA EVVARSQLKP NQPFYIQGDR 
QTPYGKVVHL FVLLKANGVS QVSLMTEPEE K