Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0888 |
Symbol | |
ID | 3761359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 967448 |
End bp | 968293 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637785608 |
Product | Short-chain dehydrogenase/reductase SDR |
Protein accession | YP_391158 |
Protein GI | 78485233 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.212887 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGACA CACAAACGAT TTTAGTTACA GGCTGCTCCA GTGGCATTGG CTATCACGCC GCAAAAACAT TGTCCCAAAA AGGCTATCAA GTCATCGCAA CCTGTCGACA AGAAGAAGAT GTGGCGCGAC TCAATCAGGA AGGCCTTACT TGTGTTCAAA TGGATTTAGC CGACTCAGCC TCTATCCAGA CAGCCGTCCA ACTCATCTTA GCCATACACC CTGTCATTGA CGTGTTGTTC AACAATGCCG CATTCGGCCT ACCCGGAGCG GTAGAAGATT TAAGTCGCGA TGCACTGCGC TTTCAGTTTG AAACCAATGT GTTTGGCACC CAAGAGCTGA CCAACCATAT CATTCCCGTC ATGCGCGCTC AAAGGTATGG AAAAATAGTC TATAACAGTT CAATCTTAGG GTTTGCCGCC ATGCAATATC GTGGCGCTTA CAATGCAAGT AAGTTTGCCA TTGAAGGCCT TGCAGATACA CTCAGACTCG AACTTAAAGC CGATAACATT CAAGTCAGTT TAATTGAGCC TGGCCCAATC AGCTCTAGCT TTCGCGCAAA CGCTTACACG CAATTCAAAC GCTGGATTCA ACCCGACCAG AGCGCACACC AAAAAAATTA CCAAGCGATG ATTAATCGAC TGGAAACCGT CGGGCCTTCA GCACCTTTTA CCTTAGGACC CGAAGCGGTG ACGAACAAGC TTGAAGCCAT CATTAACAGT CACCGTCCGG CAGTTCGTTA TCGTGTAACC GTCCCCACCA TCGTCTTTGC CTGGTTAAAA AGATTCTTAC CCAGCCGATG GCTAGATTTT CTTCTTATCA AGGCAGGTGG AGATGGCAAA CGCTAA
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Protein sequence | MQDTQTILVT GCSSGIGYHA AKTLSQKGYQ VIATCRQEED VARLNQEGLT CVQMDLADSA SIQTAVQLIL AIHPVIDVLF NNAAFGLPGA VEDLSRDALR FQFETNVFGT QELTNHIIPV MRAQRYGKIV YNSSILGFAA MQYRGAYNAS KFAIEGLADT LRLELKADNI QVSLIEPGPI SSSFRANAYT QFKRWIQPDQ SAHQKNYQAM INRLETVGPS APFTLGPEAV TNKLEAIINS HRPAVRYRVT VPTIVFAWLK RFLPSRWLDF LLIKAGGDGK R
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