Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0887 |
Symbol | |
ID | 3761358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 965218 |
End bp | 967443 |
Gene Length | 2226 bp |
Protein Length | 741 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637785607 |
Product | patatin |
Protein accession | YP_391157 |
Protein GI | 78485232 |
COG category | [R] General function prediction only |
COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTTGATAC GACTGGCTGC TTATTTTTTG CTCCTCACCA GCACGAGTAG TTTAGCCAAT ACCGAACACC CCTCTTCTGA AAAAAACTCA TCACGTCCCA AAATAGGTCT GGTCCTTCCA GGCGGTGGCG CACATGGATT GGCTCACATC GGCGTGTTAA AGCAATTGGA AAAAGCCAAC ATCCCCATTG ATTATATTTC CGGCTCCAGC ATGGGAGCCG TGATTGGTGG ACTTTATGCT TCAGGATTGA GCATCAGCCA GATAGAAAAT TTTGTCACCC ATGTCAATTG GGATCAAACC TTTACCGATG ATAACTCAAG ACATTTTCTT TCTTTTCGGC GAAAGTCAGA CCAATACAAT TATTTTGCAA AAGGTGAATT TGGCTATGAC AACGGGCGCT TTAAATTACC CAATGGATTA ATCCTTGGTC AACAACAAGC CACCCTACTT AAAGGCATGA CTCTCTCAAG CTGTAATATC AACGATTTTG ACCAGCTACC GATTCCTTTT CGTGCTGTGG CAACCGATGT CAGAACAGGG GAAGAAATTG TTTTAAAATC GGGCGACCTG TCACAAGCCC TCAGGGCGAG CATGGCGGTT CCAGGCATAT TCGCTCCCGT TTTAATCCAA GGACGCTACT TAGTGGATGG CGGCGTGACC AACAACACCC CAATCAATGT AGTCAGAGAA ATGGGCGCCG ATATTGTCAT CGTATCGGAC ATTCACACCG CCTATGACCC CAAAATGGAA ATGGACTCTT ACGTCAATAT TGGCGGCCAG ATTCTCTCCA GTATGATTAC CGCTAACAGC TTGAGACAAT TAAAAACACT CGAACCACAG GACATTTTAA TTCGACCTAC GATTCCAAAC ACAATCAGCC CAACCAACTT CAGTGATGCC AAAAAAATCA TTAAGATTGG CTATCAAGCG TGCTTGAGCC AGCTAGAAGC GCTTAAAAAA TTGGGGCATG CATCCTATTC TAAACCCGTT AGTCAGAACC CTCTACCGGT AATCGATGCC ATTCAAATCC ATAACGAGAC CACTGTTTCA GATGAGCTTA TCCGTCAAGC AATCCAACAA AAAACAGGCA TCCCAATTGA CCGTACGCAA CTGGAAACAG ACATTACCAA ACTGTATGGT CTAGGCTTTT TTGAACTCGT GACCTATACC ATTGAACGTA TGGATGGAAA AAATGTCTTG ATTATTCATA CACAAGCCCC ATCCTGGGGG CCTCATTTTT TTAAATTGAA ATTTAATTTA GCGTCTAACC TAAATGACTC TAATTTGTTC AATCTTGGTC TACGCCACAC CTATGCTCCG GCAAATAAAT TAGGAGGCGA GTGGCGCAAT AAAATAGAAA TCGGCCAAAC ACAGCTGTTG AAAACTGCCT TTTACCAACC GTTATCGTAC AGTCAAAGGC CGTATATTGA GCCTTCACTT CAGCTTAAAA AACGCATTTA CAGTTTAGGA ACGGAATCGA ACATCACATC CGTGCAACTT GAACAACAAA CCATCTCCCC AAAACTGGAA CTGGGCTATA ACCTTTTCCA AAACTGGCGG ACGTCAATGT CATATCAAAA TGAATTAGGA GATTTAATCT TAGGGAAGTA TGCCAGCTCA CAAATAAAAG AGCACTACAA TGATCACATT GTGAGCTTGG CCTTGCAGCA TGACAGCTTA GACCAAGTAA CGTTTCCACA ACGCGGAACC TTACTGAACC TGTCTTATCA CAATACACTT GAAACTCTGG ATCAGGCCAG TAAAGTCATT GAATATAAAG GGCTGCTATC AAGCTATTAC TCTTATGACC GCCATACATT CAACTTACAT GCTGAAGCAA CCACTATTGA GGCCAAAAAC AAAGACGACA TCCATCGTTT CTATACACTA GGTGGGTTTC AACGACTCTC CGGCTATGCC GAAGACGAAC TGATCGGCAA CCAGCTCCTC TTTGCTAAAC TAAAATACCT CTACCGATTC TCTGCCAGCA GCAATGCGTT AGATTTTCCA TATTACGCTG GGGTCACTCT CGAAGCCGGT AATGTTTATG ATAAAGACAC GTTTACCAAC GGAACAACAT CGGATGTCAG CTGGCAAAAC ACCAAGCAAG CAGGAAGCAT TTTTTTCGGG ATGAACACTT TTATGGGCCC GGTTCACTTT GCTTATGGGT ACCACAATGC CCAAAGACAA TCACTTTACC TCTACTTCGG TCATGCCTTT AATTAA
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Protein sequence | MLIRLAAYFL LLTSTSSLAN TEHPSSEKNS SRPKIGLVLP GGGAHGLAHI GVLKQLEKAN IPIDYISGSS MGAVIGGLYA SGLSISQIEN FVTHVNWDQT FTDDNSRHFL SFRRKSDQYN YFAKGEFGYD NGRFKLPNGL ILGQQQATLL KGMTLSSCNI NDFDQLPIPF RAVATDVRTG EEIVLKSGDL SQALRASMAV PGIFAPVLIQ GRYLVDGGVT NNTPINVVRE MGADIVIVSD IHTAYDPKME MDSYVNIGGQ ILSSMITANS LRQLKTLEPQ DILIRPTIPN TISPTNFSDA KKIIKIGYQA CLSQLEALKK LGHASYSKPV SQNPLPVIDA IQIHNETTVS DELIRQAIQQ KTGIPIDRTQ LETDITKLYG LGFFELVTYT IERMDGKNVL IIHTQAPSWG PHFFKLKFNL ASNLNDSNLF NLGLRHTYAP ANKLGGEWRN KIEIGQTQLL KTAFYQPLSY SQRPYIEPSL QLKKRIYSLG TESNITSVQL EQQTISPKLE LGYNLFQNWR TSMSYQNELG DLILGKYASS QIKEHYNDHI VSLALQHDSL DQVTFPQRGT LLNLSYHNTL ETLDQASKVI EYKGLLSSYY SYDRHTFNLH AEATTIEAKN KDDIHRFYTL GGFQRLSGYA EDELIGNQLL FAKLKYLYRF SASSNALDFP YYAGVTLEAG NVYDKDTFTN GTTSDVSWQN TKQAGSIFFG MNTFMGPVHF AYGYHNAQRQ SLYLYFGHAF N
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