Gene Tcr_0885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0885 
Symbol 
ID3760445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp963916 
End bp964821 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content48% 
IMG OID637785605 
ProductROK 
Protein accessionYP_391155 
Protein GI78485230 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAAGA TGAAAGTCGG AATTGATTTA GGTGGGACAA AAATTGAAAT TGTGGTGTTG 
GATTTTAATA ATCAGGTTTT GTTTCGTGAG CGCATAGAAA CGCCACAAGG CGATTATGAA
AAAACGGTTG ACGCCATCGT GACGCTGGTT CAGGACACAG AAGAACTCTA TGGTCCTTTT
AATCAGGTCG GGGTTGGTAT TCCGGGTGCG ATTTCTAAAA AGACCGGGAA AATTAAAAAT
GCCAATTCGA CCTGTCTAAT AGGCCAGGAT TTGAAGGGCG ATTTAGCGTC ACGGTTGAAG
ATGACGGTTC GTTTGGCTAA TGATGCCAAT TGTTTGGCCT TATCGGAAGC ATCTGATGGG
GCTGCGGCCG GTGAAGAGGT GGTGTTTGGT GTGATCCTCG GAACCGGTTG TGGTGGCGGT
TTGATTGTAG ATGGGCATAT TGTCAATGGC GTGAATGCCA TTGCTGGAGA ATGGGGACAC
AATCCCTTGC CTTGGCGCAC TTCCGATGAT GCTGAAAATG CGTGCTATTG TGGTTTAAAG
GGTTGCCTTG AAACGTTTTT ATCCGGACCG GGCATGTCAA AACATTATGA AAGAATGACT
GGCGAAGTGA TGTCGGTGCA GGAAATTGCT GCTTTGGCTC AACAAGAAAA TACGGCTGCG
CAAGCGATGC TCGAAACTTA TGCCGTTTGG TTGGCAAAAG GCTTGGCGAG TGTTATCAAT
ATGGTTGATC CGGATGTGAT TGTGCTTGGT GGCGGCTTGT CCAATATGAC GTTTTTATAT
CAACGCGTGC CCGAACTTTG GGGGCGGTGG GTCTTCAGTG ATCAAGTGGA AACCCGACTT
GTTCCTCCTA AATGGGGCGA TTCCAGTGGG GTTCGCGGCG CGGCTTGGCT GAGTAAAGTG
GATTAA
 
Protein sequence
MIKMKVGIDL GGTKIEIVVL DFNNQVLFRE RIETPQGDYE KTVDAIVTLV QDTEELYGPF 
NQVGVGIPGA ISKKTGKIKN ANSTCLIGQD LKGDLASRLK MTVRLANDAN CLALSEASDG
AAAGEEVVFG VILGTGCGGG LIVDGHIVNG VNAIAGEWGH NPLPWRTSDD AENACYCGLK
GCLETFLSGP GMSKHYERMT GEVMSVQEIA ALAQQENTAA QAMLETYAVW LAKGLASVIN
MVDPDVIVLG GGLSNMTFLY QRVPELWGRW VFSDQVETRL VPPKWGDSSG VRGAAWLSKV
D