Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0885 |
Symbol | |
ID | 3760445 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 963916 |
End bp | 964821 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637785605 |
Product | ROK |
Protein accession | YP_391155 |
Protein GI | 78485230 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAAGA TGAAAGTCGG AATTGATTTA GGTGGGACAA AAATTGAAAT TGTGGTGTTG GATTTTAATA ATCAGGTTTT GTTTCGTGAG CGCATAGAAA CGCCACAAGG CGATTATGAA AAAACGGTTG ACGCCATCGT GACGCTGGTT CAGGACACAG AAGAACTCTA TGGTCCTTTT AATCAGGTCG GGGTTGGTAT TCCGGGTGCG ATTTCTAAAA AGACCGGGAA AATTAAAAAT GCCAATTCGA CCTGTCTAAT AGGCCAGGAT TTGAAGGGCG ATTTAGCGTC ACGGTTGAAG ATGACGGTTC GTTTGGCTAA TGATGCCAAT TGTTTGGCCT TATCGGAAGC ATCTGATGGG GCTGCGGCCG GTGAAGAGGT GGTGTTTGGT GTGATCCTCG GAACCGGTTG TGGTGGCGGT TTGATTGTAG ATGGGCATAT TGTCAATGGC GTGAATGCCA TTGCTGGAGA ATGGGGACAC AATCCCTTGC CTTGGCGCAC TTCCGATGAT GCTGAAAATG CGTGCTATTG TGGTTTAAAG GGTTGCCTTG AAACGTTTTT ATCCGGACCG GGCATGTCAA AACATTATGA AAGAATGACT GGCGAAGTGA TGTCGGTGCA GGAAATTGCT GCTTTGGCTC AACAAGAAAA TACGGCTGCG CAAGCGATGC TCGAAACTTA TGCCGTTTGG TTGGCAAAAG GCTTGGCGAG TGTTATCAAT ATGGTTGATC CGGATGTGAT TGTGCTTGGT GGCGGCTTGT CCAATATGAC GTTTTTATAT CAACGCGTGC CCGAACTTTG GGGGCGGTGG GTCTTCAGTG ATCAAGTGGA AACCCGACTT GTTCCTCCTA AATGGGGCGA TTCCAGTGGG GTTCGCGGCG CGGCTTGGCT GAGTAAAGTG GATTAA
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Protein sequence | MIKMKVGIDL GGTKIEIVVL DFNNQVLFRE RIETPQGDYE KTVDAIVTLV QDTEELYGPF NQVGVGIPGA ISKKTGKIKN ANSTCLIGQD LKGDLASRLK MTVRLANDAN CLALSEASDG AAAGEEVVFG VILGTGCGGG LIVDGHIVNG VNAIAGEWGH NPLPWRTSDD AENACYCGLK GCLETFLSGP GMSKHYERMT GEVMSVQEIA ALAQQENTAA QAMLETYAVW LAKGLASVIN MVDPDVIVLG GGLSNMTFLY QRVPELWGRW VFSDQVETRL VPPKWGDSSG VRGAAWLSKV D
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