Gene Tcr_0884 details

Gene Information

• Locus tag: Tcr_0884
• ID: 3760444
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thiomicrospira crunogena XCL-2
• Kingdom: Bacteria
• Replicon accession: NC_007520
• Strand: +
• Start bp: 963270
• End bp: 963923
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637785604
• Product: hypothetical protein
• Protein accession: YP_391154
• Protein GI: 78485229
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase

Plasmid Coverage information

• Num covering plasmid clones: 48
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACTCA GTGATAAACA GCGTCAGCGA ATTATTAAAC GCCACCAGCA CGCCATTCAA 
GAAAGAGGCT ATCAAGCGAC TGCTTTATTT TGGAGCAGTC AGTCCGTGCA AGAAAAACGT 
TTTGATGTTT TGATGGATTA TATTCGTTTA CACAGCGAGC CTGAAATTGG TAAGTCGATC 
ACGCTACTGG ATGTGGGGTG CGGTTTTGGT GACCTGTCCC CGTATCTAAA GACCGCCGGA 
TTTCAGGTGG CTTACACTGG CATTGATGTT TCCCCTGATA TGGTTCAAGC TGGGCAATTC 
AAGCATCAAG ACATTCGTTT GTTACATGGA GAACTGTTTG ATTTTGATTG GGCGGAAGCG 
TCTTTTGATT GGGTCGTCTG TTCGGGCGCG ATGAATGAAG TGGTTGACCC TCATGGACGA 
GAGGGAGAGT CTGCTCAGGC AATGATTCAA AAAATGTATA CGCTTTCTCG AAAGGGTGTG 
GTGTTTAATT TATTGAATGC CGCGCATGAA TGGACAAATT CTCGACCGGA TTTACAGAGT 
TTTGGACCAC AAGCGATAAC GGATTTTTGT GAAAAATTTG CAACCCAAGT GTCTGTCAAA 
CAGGATTATC TTCCAAATGA CTTTACGGTT TGTTTAACCA AGATGGATGA TTAA 

 

Protein sequence

MKLSDKQRQR IIKRHQHAIQ ERGYQATALF WSSQSVQEKR FDVLMDYIRL HSEPEIGKSI 
TLLDVGCGFG DLSPYLKTAG FQVAYTGIDV SPDMVQAGQF KHQDIRLLHG ELFDFDWAEA 
SFDWVVCSGA MNEVVDPHGR EGESAQAMIQ KMYTLSRKGV VFNLLNAAHE WTNSRPDLQS 
FGPQAITDFC EKFATQVSVK QDYLPNDFTV CLTKMDD