Gene Tcr_0870 details

Gene Information

• Locus tag: Tcr_0870
• ID: 3760430
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thiomicrospira crunogena XCL-2
• Kingdom: Bacteria
• Replicon accession: NC_007520
• Strand: +
• Start bp: 949045
• End bp: 950961
• Gene Length: 1917 bp
• Protein Length: 638 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 637785590
• Product: heat shock protein Hsp70
• Protein accession: YP_391140
• Protein GI: 78485215
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR02350] chaperone protein DnaK

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.100089
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGAAAAA TTATCGGGAT TGACTTAGGG ACAACAAACT CGTGTGTCGC AGTCATGGAA 
GGAAAAGAAA CAAAAGTAAT TCCTAACGCG GAAGGGGCTC GTACAACGCC TTCTATCGTA 
GCTTATGCCG ATGACGGTGA AGTGTTAGTT GGGGATTCTG CAAAACGTCA AGCGGTGACG 
AACCCAGAAA ACACCTTGTT TGCTATCAAG CGTCTGATTG GTCGTCGTGC CGATGACGCG 
GTTGTTGAAA AAGATAAAGA TATGGTGTCT TACAAAATCA TCGCTGCAGA CAATGGTGAT 
GCGTGGGTAC AGGTAGGCGA TAAAAAGCTT TCTCCACAAG AAGTGTCTGC TCGTACATTG 
ATGAAAATGA AGAAAACCGC AGAAGATTAT TTAGGTCATG AAGTGACGGA AGCGGTTATC 
ACCGTACCGG CTTACTTTAA TGACTCTCAG CGTCAAGCAA CAAAAGATGC GGGTAAAATC 
GCAGGTCTAG AAGTTAAGCG TATCATCAAC GAGCCAACGG CAGCGGCCTT GGCTTATGGT 
ATGGATAAAG TTAAAGCGGA CAGCAAAATC GCGGTTTACG ATTTAGGTGG TGGGACATTC 
GATATCTCAA TCATCGAAGT CGCCGATCTA GATGGTGAAA AGCAAGTTGA AGTTTTATCA 
ACCAATGGTG ACACTTTCTT AGGGGGTGAA GACTTCGATA ACGTGATCGT AGATTACATC 
GCAACCGAAT TTAAGAAAGA TCAAAATGTT GACTTGAAGC TGGATAAATT AGCACTTCAA 
CGTGTTCGTG AAGCGGCTGA GAAAGCAAAA ATTGAACTTT CATCACGTGA GCAAACAGAC 
ATTAACTTGC CATACGTAAC GGCTGATGCA ACCGGGCCTA AGCATTTAAA CATGAAGATT 
ACCCGTGCGA AGTTTGAGTC GTTAATTGAA GGTTTGGTTC AGCGTTCAAT CGATCCTTGT 
AAGACAGCTC TTAAAGACGC TGGTTTATCC GCGTCTGAAA TTGATGATGT TATCTTAGTG 
GGTGGTTCAA CGCGTGTTCC AATGGTTCAA GCGGCGGTTA AAGAGTTCTT CGGTAAAGAG 
CCACGTAAAG ATGTTAACCC GGATGAAGCT GTGGCAATGG GTGCTGCAAT TCAAGGGGGT 
GTCTTATCTG GTGATGTGAA CGATGTTCTT CTATTAGACG TAACACCTTT ATCTCTAGGG 
ATTGAGACAA TGGGTGGCGT GATGACGAAG TTGATCGAGA AAAACACGAC CATTCCGACA 
CGTAAGTCGC AAACGTTCTC GACGGCGGAA GACAATCAGT CAGCGGTAAC CATTCACGTA 
CTTCAAGGGG AGCGTGAAGT GTCATCGGGG AACAAGTCTT TAGGTCAATT CAACCTAGAC 
GAAATTCCAC CTGCACCGCG TGGTACGCCA CAAATCGAAG TAACATTCGA CATTGATGCA 
AACGGTATCT TGAATGTTTC TGCGAAAGAC AAAGCGACAA ATAAAGAGCA GCACATCACT 
ATCCAAGCGT CATCTGGTTT GTCTGAAGAT GAAATCGAAG CAATGGTTAA AGATGCTGAA 
GCACATGCTG CTGAAGATGC GAAACTGAAA GAGTTGGTTG AAGCGCGTAA CCAAGCGGAT 
GCGATGGTTC ACGGTACCAA GAAGCTTTTA GATGAGCAGG GTGAAGGGGT TGAAGCCGCT 
GAAAAAGAAG CCATTGAAAA AGCAATTGCG GATCTTGAAG AGGCTATTAA AGGCGATGAC 
AAAGCGGTTA TCGACGAGAA AACCCAAGCA TTGGCAACAG CCAGTCAGAA GCTGGCTGAA 
AAAGCATATG CACAACCTGG TGCAGAAGCG GGTGCTGAGC AACAAGGTTC TGCAAACAAT 
GCGGACGATG ACATCGTTGA CGCTGAGTTT GAAGAAGTGA ATGATGACAA AAAATAA 

 

Protein sequence

MGKIIGIDLG TTNSCVAVME GKETKVIPNA EGARTTPSIV AYADDGEVLV GDSAKRQAVT 
NPENTLFAIK RLIGRRADDA VVEKDKDMVS YKIIAADNGD AWVQVGDKKL SPQEVSARTL 
MKMKKTAEDY LGHEVTEAVI TVPAYFNDSQ RQATKDAGKI AGLEVKRIIN EPTAAALAYG 
MDKVKADSKI AVYDLGGGTF DISIIEVADL DGEKQVEVLS TNGDTFLGGE DFDNVIVDYI 
ATEFKKDQNV DLKLDKLALQ RVREAAEKAK IELSSREQTD INLPYVTADA TGPKHLNMKI 
TRAKFESLIE GLVQRSIDPC KTALKDAGLS ASEIDDVILV GGSTRVPMVQ AAVKEFFGKE 
PRKDVNPDEA VAMGAAIQGG VLSGDVNDVL LLDVTPLSLG IETMGGVMTK LIEKNTTIPT 
RKSQTFSTAE DNQSAVTIHV LQGEREVSSG NKSLGQFNLD EIPPAPRGTP QIEVTFDIDA 
NGILNVSAKD KATNKEQHIT IQASSGLSED EIEAMVKDAE AHAAEDAKLK ELVEARNQAD 
AMVHGTKKLL DEQGEGVEAA EKEAIEKAIA DLEEAIKGDD KAVIDEKTQA LATASQKLAE 
KAYAQPGAEA GAEQQGSANN ADDDIVDAEF EEVNDDKK