Gene Tcr_0854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0854 
Symbol 
ID3761738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp930103 
End bp932574 
Gene Length2472 bp 
Protein Length823 aa 
Translation table11 
GC content47% 
IMG OID637785574 
Producthypothetical protein 
Protein accessionYP_391124 
Protein GI78485199 
COG category[S] Function unknown 
COG ID[COG3002] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGTTGC ACAACGCAAA AGCTTCTGAT AATAATGAGT TGGATCAGGC TAAGCCGTTG 
ATTCCCCAGC TTTCAGACAA ACAAAAAGAA GCTTTGAACG ATGCTTGTGG ACGCATTGCA
CCAACTTGGC CGCTGGATGA ATTGATTGCG GTAAACCCAT GGTGGGAAAT GCGAGATCAG
CATATTTCTA AAGTTTCAGC CAAACTCAGC GCGTTGAGCC AAGCTCAGTG CGTGATGCCG
AAATCTTATT TCCAGGAAGT CTGGATGGAA ACGTTGCAAC CTCAGCATGT ACAGCAAGCC
ATCGATGAGA TGGAAAAAGA TTATACCGTG GACAATCTTG AACGGTATTT GCTGGAAGAA
GACGAACATA CACATTGGCA TAACGTTAGC GATTTTGTTG ATAGTGGACG AGATCGTAAA
TATAAAATGG CTTGGCGAGA TGAAATTACC CATCAAATCA GTCAATTTTG TGCGGATTTT
TTCCGTTTAA AAGACAGCCA GGGAACGTTC TCTAAGACTT ATCAAGGTCT TTATCATGAG
TGGTTGGCGA CAACCCGTCA GGATAAGGGA ATTGAGATCC TTATGGGAGA AGATGGGCTG
ACTGAGCATT TTATGGACCT GCCGGAAAGC AGTGAAAGCC TGCTGGCTGA AGCCTTGGTC
GGCTTAAGAG TGCCAGATAG TCAAATTGCC GATTATGCAC ACGCGTTGTT ATTAGATGCT
AATGGGTGGG CTTCTTGGGT AGCGTATTTA CGTTGGCAAG ACCGTTTAAG CAATGCTGAA
AATGACTTGA TGATGGACTT TCTAGCGATT CGTGTCGCGT GGGAATGGGT ACTGTGGCAG
CATCAAAAAG ACAGTGATCG TTCTGTCTTC AATGAATTAA AAGTTATGTG GCATCATCAA
ATGAGCATCT TGCCGGATTT GATTGCCACC CATGAAGCGG CTCAAGCGAA ATCTTGGATT
TGGCAAAGAG CCGCTGAAAT TGCGTATCAG TCTGAGTTAC AACAGCAACT TAAACACGCC
AGTAGAACAG ACCAAAAAGT AGAGACCGAA TCGCCGCCGG TTTTGCTGCA AGCCGCTTTT
TGTATTGATG TGCGATCGGA AGTCATTCGT CGTGCTTTAG AAGCGCAAGA TTCTCGAGTT
GAAACACTGG GCTTTGCTGG CTTTTTTGGA TTGCCAATTG AGTATCAACC GGCAGGCACC
GATGTGTCTC GTCCTCAGTT ACCGGGGTTG TTAAAATCAG GCATTAAAGT CACGCCGGTG
ATGACGAAAG TGTCTAAAGG CGCAACCAAA CAAGCCTTAA ACCGAAAAGC ACGTTGGATT
GAGTGGGGAA ATGCACCTCC GGCAACGTTT AGTATGGTCG AAGCGACCGG GTTAATGTAC
GCGTTTAAAT TATTGCGTAA CAGCTTGTTT CCTGAAAGCC ACACGAACCC GATTAATGCG
ATACCTGCGA CAGATGCATT TGAACTCACC CAGAATGACT CCCCTTTAAC GCTAGATCAA
AAAGTGGAGC TGGCTGCAGG GATTTTGCAT GCCATGGGGC TGGATCATGA TCTCGCTGAA
ACGGTAATGC TTGTGGGGCA TGGCAGCACC AGTTGTAATA ACCCGCATGC AGCCGGGCTG
GACTGCGGTG CTTGCGGTGG GCAAACGGGT GAAATCAATG TGCGGGTGTT AGCGTTCTTG
CTCAACGATG AATCGGTTCG TCAGGGCTTA CTGGAAAAAG ACATCAAAAT TCCGGCGCAA
ACTCGTTTTG TGGCGGCCAT GCATAATACC ACCACCGATG AATTCACTTG TTTTGGTTTG
AATCATGTGG ATGAAACCAT TCAAAAATGG TTAGCGAGAG CAACTGAGTT CGCTCGCCAA
GAGCGTTCGA CGCGATTGGG ATTGAATCAT CTTGAAGGTC AAAACCTACA CCAGAGCATT
CAGCGTCGCG CCAAAGACTG GTCTCAAGTC AGACCGGAGT GGGGCTTGTC CAATAATGCA
GCTTTTATTG TTGCGCCGCG CGCCAGAACA AGAGGGGTGG ATTTTCAAGG GCGTGCCTTT
TTGCATGATT ATGATTGGCA ACAAGATGCC GATAACAGTT TATTAACCTT GATTATGACC
GCGCCGATGG TGGTGACCAA CTGGATTAAC CTACAATATT ATGCATCTGT CTGCGATAAT
CACGTTTATG GAAGTGGGAA TAAAGTCCTG CACAATGTGG TGGATGGTTG CATCGGTGTT
TTTGAAGGGA ATGGCGGCGA TTTACGAATC GGGTTGCCGA TGCAGTCTTT GCATAATGGT
GAGAAATGGA TGCACGAACC TTTGCGTTTG AGCGTGTACA TTGATGCACC GCAGAAAACG
ATTGCACAAG TCGTCGCTGA GAATGACGTG GTTCGTCATT TAATTGATAA TGAATGGTTG
TATTGCTTTA GCTGGGCTCC GGATGGTCGC ATCCATCGTT ATTTTAACAA TCAGTGGTTG
GAATCTGCCT GA
 
Protein sequence
MMLHNAKASD NNELDQAKPL IPQLSDKQKE ALNDACGRIA PTWPLDELIA VNPWWEMRDQ 
HISKVSAKLS ALSQAQCVMP KSYFQEVWME TLQPQHVQQA IDEMEKDYTV DNLERYLLEE
DEHTHWHNVS DFVDSGRDRK YKMAWRDEIT HQISQFCADF FRLKDSQGTF SKTYQGLYHE
WLATTRQDKG IEILMGEDGL TEHFMDLPES SESLLAEALV GLRVPDSQIA DYAHALLLDA
NGWASWVAYL RWQDRLSNAE NDLMMDFLAI RVAWEWVLWQ HQKDSDRSVF NELKVMWHHQ
MSILPDLIAT HEAAQAKSWI WQRAAEIAYQ SELQQQLKHA SRTDQKVETE SPPVLLQAAF
CIDVRSEVIR RALEAQDSRV ETLGFAGFFG LPIEYQPAGT DVSRPQLPGL LKSGIKVTPV
MTKVSKGATK QALNRKARWI EWGNAPPATF SMVEATGLMY AFKLLRNSLF PESHTNPINA
IPATDAFELT QNDSPLTLDQ KVELAAGILH AMGLDHDLAE TVMLVGHGST SCNNPHAAGL
DCGACGGQTG EINVRVLAFL LNDESVRQGL LEKDIKIPAQ TRFVAAMHNT TTDEFTCFGL
NHVDETIQKW LARATEFARQ ERSTRLGLNH LEGQNLHQSI QRRAKDWSQV RPEWGLSNNA
AFIVAPRART RGVDFQGRAF LHDYDWQQDA DNSLLTLIMT APMVVTNWIN LQYYASVCDN
HVYGSGNKVL HNVVDGCIGV FEGNGGDLRI GLPMQSLHNG EKWMHEPLRL SVYIDAPQKT
IAQVVAENDV VRHLIDNEWL YCFSWAPDGR IHRYFNNQWL ESA