Gene Tcr_0850 details

Gene Information

• Locus tag: Tcr_0850
• ID: 3761734
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thiomicrospira crunogena XCL-2
• Kingdom: Bacteria
• Replicon accession: NC_007520
• Strand: +
• Start bp: 925893
• End bp: 926504
• Gene Length: 612 bp
• Protein Length: 203 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 637785570
• Product: Ham1-like protein
• Protein accession: YP_391120
• Protein GI: 78485195
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0127] Xanthosine triphosphate pyrophosphatase
• TIGRFAM ID: [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family

Plasmid Coverage information

• Num covering plasmid clones: 54
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGTCTC CGATTATTTT GGCAACCAAC AACCCATATA AAGTGGCTGA AATTGCGCCC 
ATTATGAACA GAGCAGGGCT TGTAACTCAG TGCCAAGCCG ACTTCTTTAA TGAAGAAGTG 
GTTGAAGATG AATTGAGTTT TGTGGAAAAC GCTTTAAAAA AAGCCCGTTT TGCCAGTGAA 
AGAACAGGGT TGCCGGCCTT GGGAGATGAT TCCGGGTTGG AAGTGAATGC CCTTGGAGGC 
AGGCCTGGTC TTTTTTCGGC CCGATATGCA GGCGGTGAGC AAAAGCCGTC TGATGAAGAG 
AATTTAAAAA AGTTGTTAAA TGATATGACC CAACTCCCTT ATCCACAGCG CCAAGCTCGT 
TATTCTTGTG CTGTGGTTTA TGTTGAAAAT GCGCAAGATC CGATGCCTTT GATCGGTATC 
GGTCATTGGT ACGGTGAAAT TTTAATGAGA CCTAGAACCG GTGCTGGTAT TGGTTATGAC 
GATGTGTTTT GGATTCCGAA GTTATTGAAA TCGGTGTCGG AAATTCCATT TGAATTGAAG 
AACCAAATCA GCCACCGCGC CAGAGCCGTA CAATCGGTTG TTCAACAACT GACAGAAAGG 
GGCGGACGAT GA 

 

Protein sequence

MMSPIILATN NPYKVAEIAP IMNRAGLVTQ CQADFFNEEV VEDELSFVEN ALKKARFASE 
RTGLPALGDD SGLEVNALGG RPGLFSARYA GGEQKPSDEE NLKKLLNDMT QLPYPQRQAR 
YSCAVVYVEN AQDPMPLIGI GHWYGEILMR PRTGAGIGYD DVFWIPKLLK SVSEIPFELK 
NQISHRARAV QSVVQQLTER GGR