Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0828 |
Symbol | |
ID | 3762156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 898746 |
End bp | 900722 |
Gene Length | 1977 bp |
Protein Length | 658 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637785547 |
Product | proton-translocating NADH-quinone oxidoreductase, chain L |
Protein accession | YP_391098 |
Protein GI | 78485173 |
COG category | [C] Energy production and conversion [P] Inorganic ion transport and metabolism |
COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTTTAA AATTTTTATT AACCATTATC CTTTTATCAC CGCTATTTGG TGCGGTTGCA GCAGGGTTAT TTGGTCGTCA AATTGGACGA CGCGGGGCAC ACACGATCAC CATTTTCGGT GTGGCTGTGT CTACGATTTT ATCGGCTTAT GTTTTCTGGC TTTTTGTTTT CAATGGTCAA GCAGCCTATA ACGACTCGCT TTACACTTGG TTGGTTTCTG ACGGCATCCG TTTCGAAATC GGTTACATGA TTGATGAGCT GTCGGCCACA ATGATGTTGG TGGTCACGTT TGTTTCATTG ATGGTTCATA TCTACACCAT TGGCTATATG GATCATGATG AAGACTATGA ACACTCGAAT CCTTATTATC AAAGATTCTT CAGTTACATT TCGTTGTTCA CTTTTTCAAT GCTGTCGCTT GTTATGGCGA ACAACTTCTT ACAGCTTTTC TTTGGTTGGG AAGCCGTTGG GTTGGTGTCA TATTTGTTGA TCGGTTTCTA TATGAAACGT GAGTCGGCCA TTCAAGCAAA TTTAAAAGCG TTCTTAGTGA ACCGTGTAGG GGATTTCGGT TTCATTCTTG GGATCGCCGT TGTGGTGATG TATTTTAATA CTTTGGATTA CAATGACTTC TTCGCAGGAT TGGAAGCACA TAAAGAAACG ACAATCAGTT TCTTCCCGGG TGTTGAATGG TCAATGATCA CAGCATTGTG TTTATTGTTA TTCGTTGGCG CCATGGGGAA ATCAGCGCAA ATGCCATTAC ACGTTTGGCT GCCAGAATCG ATGGAAGGTC CAACACCTAT TTCGGCGTTA ATCCATGCGG CAACAATGGT TACTGCAGGG ATCTTTATGG TTGCGCGTTT ATCACCGGCT TATGAAATGT CTGAAGTGGC TTTGAGCGCT ATTTTAATCA TTGGTGCAAC AACGGCCTTC ATGATGGGTG CACTTGGGAT TGTTCAGAAC GATATTAAAC GAGTGGTGGC TTACTCAACC TTGTCACAGC TTGGTTATAT GGTTGCGGCA CTCGGGGCTT CAGCTTATGC GGCTGGGATG TTCCATGTAT TAACGCATGC ATTCTTTAAA GCCTTATTGT TCTTAGCGGC TGGGTCAGTC ATTATCGCCA TGCACCATAT TCAAGATATT CGTCAAATGG GTGGCTTGCG TAAGCATATG CCCGTGACCT ACATTGCCTT GTTGGTTGGA ACACTAGCGT TGATCGGGTT CCCAGGTTTC TCTGGTTTCT TCTCAAAAGA CAGTGTCTTA ATGGCCGTGG GTCAAACCGA TGTGTTTGGC GCGGGCTATG CACAAATCCT GTTGTTAATC GGGGTGTTTG TCACCGCTTT CTACAGCTTT AGAATGTTCT TCCTGGTCTT CCACGGGCAA GAGTCGGATT ATGTGAAAAA CCATAAGATT TCAGAATCAC CACTGGTGGT CACAGTACCA CTGATCTTAC TGGCGATTCC AGCTGTCATT ATGGGCTTAC CGATGATGGA TGGCATTTTT TCGGGCAGTT ATTTCGGTAG TTCTATCACC GTGTTGCCAG AAAATGACGT TCTAAAAACA ATCTATACTG AGCAGTACCA TGGTGTGGTC GACATGATCG TTCACTCTTT GACAACAGCA CCGGTTATTT TAGCCTTCTC AGGTGTTTTC TTAGCATGGT TGCTGTATAT TAAGCGCCCA GAATTGCCTG GCAAAATCAA ACAAGCTTGT CCGCGTGGGT TCTATATGCT GGACAACGCT TACGGTTTTG ACCGTTTCAA TGAAATTGTG TTTGAAAAGG GCGCTCGTAA GTTAGGGAAC TATTTCTGGA AATCGGTTGA TGTGAAGTTG ATCGATACCG GAATTGTAAC CAACGGATTT ACATCCATTG CAAACGCGGC CTCTGCATTG AGACTGAGTC AGACTGGTTT CTTATACCAC TATGCGTTTG TAATGATCTT TGGCCTGCTA GCGATGCTAG TTTGGGTACT GTGGTAA
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Protein sequence | MILKFLLTII LLSPLFGAVA AGLFGRQIGR RGAHTITIFG VAVSTILSAY VFWLFVFNGQ AAYNDSLYTW LVSDGIRFEI GYMIDELSAT MMLVVTFVSL MVHIYTIGYM DHDEDYEHSN PYYQRFFSYI SLFTFSMLSL VMANNFLQLF FGWEAVGLVS YLLIGFYMKR ESAIQANLKA FLVNRVGDFG FILGIAVVVM YFNTLDYNDF FAGLEAHKET TISFFPGVEW SMITALCLLL FVGAMGKSAQ MPLHVWLPES MEGPTPISAL IHAATMVTAG IFMVARLSPA YEMSEVALSA ILIIGATTAF MMGALGIVQN DIKRVVAYST LSQLGYMVAA LGASAYAAGM FHVLTHAFFK ALLFLAAGSV IIAMHHIQDI RQMGGLRKHM PVTYIALLVG TLALIGFPGF SGFFSKDSVL MAVGQTDVFG AGYAQILLLI GVFVTAFYSF RMFFLVFHGQ ESDYVKNHKI SESPLVVTVP LILLAIPAVI MGLPMMDGIF SGSYFGSSIT VLPENDVLKT IYTEQYHGVV DMIVHSLTTA PVILAFSGVF LAWLLYIKRP ELPGKIKQAC PRGFYMLDNA YGFDRFNEIV FEKGARKLGN YFWKSVDVKL IDTGIVTNGF TSIANAASAL RLSQTGFLYH YAFVMIFGLL AMLVWVLW
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