Gene Tcr_0823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0823 
Symbol 
ID3762151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp894076 
End bp896178 
Gene Length2103 bp 
Protein Length700 aa 
Translation table11 
GC content42% 
IMG OID637785542 
ProductNADH dehydrogenase subunit G 
Protein accessionYP_391093 
Protein GI78485168 
COG category[C] Energy production and conversion 
COG ID[COG1034] NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) 
TIGRFAM ID[TIGR01973] NADH-quinone oxidoreductase, chain G 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.477547 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAAAAA TTGAGATTAA CGGACAAATG GTTGAAGCTC ATGAAGGCGA CATGCTGATA 
GATGTTGCTG ATGATGCTCA AATCTCTATT CCACGATTCT GTTATCACAA AAAACTTTCA
ATCGCAGCAA ACTGTCGTAT GTGTTTGGTT GAGGTTGAAG GTGCACCTAA AGCATTACCT
GCTTGTGCAA CGCCGGTAAC AGACGGCATG AAAGTTCATA CGAAATCTGA AAAAGCCGTA
TCGGCACAGA AATCGGTTAT GGAATTTTTA CTGATTAACC ATCCTTTGGA TTGCCCAATT
TGCGACCAAG GTGGCGAGTG TGAATTACAA GACGTTGCGA TGGAATATGG CGATGATGTC
TCGCAATATT CAGAGGCCAA ACGAATTCTG GGTGATAAAA ACATCGGTTC TTTGATCCAT
ACCGATATGA CACGTTGCAT TCACTGTACG CGTTGTGTTC GTTTTGGACA GGAAATCGGT
GGCATGATGG AACTAGGTGC TACTGGTCGT AGTGAATGGA TGGAGATTGG AACCTATATT
GAAAAGTCCG TCACATCAGA GCTTTCCGGA AACATGATTG ACCTATGCCC GGTTGGAGCG
TTGACGTCTA AGCCTTTCCG TTATTCAGCA CGTCCTTGGG AATTGAAATC TCATAAGACA
ATTGCCCCGC ATGACAGTAT TGGTTCCAAC ATTATTTTGC ACTCCAAGAA CAACATCGTA
AAACGTGTTG TGCCGGATGA AAACGAAGCC GTCAATGAAG TGTGGATTTC AGACAGAGAC
CGTTTCTCAT ATGAAGCGTT AAACAGTGAT GACCGTTTAT TGCACCCAAT GATCAAAGAA
AAAGGTCAGT GGAAGCAGGT CGATTGGGAA ACAGCTTTAG CGTATGCGGC TAAAAAATTG
AAAGACTACA TCCATGCGGA CGCATCTAAA GTCGGTGTGT TGGCATCATC TAACGCCACA
TTAGAAGAAC TGTATTTGCT GCAAAAATTA GCACGTGCTG TCGGTGTTGA AAACTTGGAT
CATCGTTTAC GCCAAGCTGA TTTCAGCCTC GATAAAACAG GCTTTATCGC GCCTAAGCTG
AACCACTCAT TAAAAGAAGT GGAAGCGCTG GATAATGTCT TACTGGTCGG TTCTTATCTA
AGAAAAGAAA TTCCATTATT AAATCATCGT GTACGTAATG CTCATTTAAA TGGTGCGATT
GTTTCTGCGG TGAACCCTGT TGATTTTGAT TTTAACTACA AACTTAATCA ACAATTGGTC
TCTGAAAATC TGGTGAATGA GTTAGCGGGT ATTACTAAAG CCGTGGCGGA TCTAACCGGT
AAAAATGACC AGGCCTGGCT AAAAACGATT GAAGCAAGCG ATGCTCAAAC GCAGCTAGCA
AAAGGCTTAG TGGATGCTAA GAATGCCTCG ATTATGGTCG GACAGATTGC TCAAATGGAT
AAACACTATG CCGAGATCGT TAAATTAGCG AACCTGATTT CTGAAATGAC TTCTGTTCAA
TTGAATGTTT TGCCTATGAC CGCTAACGAA GTGGGTGCGC ACATGGTTGG TTTTGTTCCT
AAAAATGGTT TGAATGTATC CGATATGGTA TCTGGAAATA TGAAAGCATT CATTAACTTA
GGAATTGAAC CTGAAAAAGA TCTTCAAGAT GGCAGTCTGG CTTTGAAAGC CATGCAAGAA
GCAGAGTGTG TGATTAACTT AACGGCTTTT GATACGGATG CTCAGCGTGA GTATGCCGAT
ATTATGTTAC CGATTTCAAC TTTTGCTGAA ACCGCTGGAA CATTTGTTAA CGCGTGTGGT
TTAAAACAAT CCTTCAAAAT GGCCGTTGAA CCTCAGGGTG ATGCAAAGCC TGCCTGGAAA
ATCTTCCGAG TGCTTGGCAA TATGCTTGAC TTAGATGGGT TTGAATACAC GCATGCCAAT
CAAGTGATGG CAGATGTAAC AGATGAAACA CAGTCAGTTG ATCTTTCGGC GGCAACATTC
GAAATGCCAG CCGATGCTGA TTTAATCGGT ACACAATTAA TTTCCATGTA TCAAGTGGAT
GCTTTAGTAA GACGTTCTCC GTCATTACAA GCAACACCTG ATGCTCAGGT TGTGACAAAT
TAA
 
Protein sequence
MVKIEINGQM VEAHEGDMLI DVADDAQISI PRFCYHKKLS IAANCRMCLV EVEGAPKALP 
ACATPVTDGM KVHTKSEKAV SAQKSVMEFL LINHPLDCPI CDQGGECELQ DVAMEYGDDV
SQYSEAKRIL GDKNIGSLIH TDMTRCIHCT RCVRFGQEIG GMMELGATGR SEWMEIGTYI
EKSVTSELSG NMIDLCPVGA LTSKPFRYSA RPWELKSHKT IAPHDSIGSN IILHSKNNIV
KRVVPDENEA VNEVWISDRD RFSYEALNSD DRLLHPMIKE KGQWKQVDWE TALAYAAKKL
KDYIHADASK VGVLASSNAT LEELYLLQKL ARAVGVENLD HRLRQADFSL DKTGFIAPKL
NHSLKEVEAL DNVLLVGSYL RKEIPLLNHR VRNAHLNGAI VSAVNPVDFD FNYKLNQQLV
SENLVNELAG ITKAVADLTG KNDQAWLKTI EASDAQTQLA KGLVDAKNAS IMVGQIAQMD
KHYAEIVKLA NLISEMTSVQ LNVLPMTANE VGAHMVGFVP KNGLNVSDMV SGNMKAFINL
GIEPEKDLQD GSLALKAMQE AECVINLTAF DTDAQREYAD IMLPISTFAE TAGTFVNACG
LKQSFKMAVE PQGDAKPAWK IFRVLGNMLD LDGFEYTHAN QVMADVTDET QSVDLSAATF
EMPADADLIG TQLISMYQVD ALVRRSPSLQ ATPDAQVVTN