| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0820 |
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| Symbol | |
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| ID | 3762148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 890993 |
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| End bp | 892246 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637785539 |
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| Product | NADH dehydrogenase subunit D |
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| Protein accession | YP_391090 |
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| Protein GI | 78485165 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 |
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| TIGRFAM ID | [TIGR01962] NADH dehydrogenase I, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.205502 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGAAA TTCGTAACTA TACCCTGAAT TTTGGTCCAC AACATCCTTC CGCGCATGGT
GTGTTGCGTT TGGTTTTGGA ATTAGATGGG GAAACCATCG TTCGCTCTGA TCCACACATT
GGATTATTGC ACCGTGGAAC TGAGAAGCTA GCAGAATATA AACCGTTCAA TCAATCAATT
GGTTATATGG ATCGTTTGGA CTATGTTTCA ATGATGGCCA ATGAGCATGC TTATGTCATG
GGCATTGAAA AAATGCTGGG CATTGAAGTA CCAGAGCGTG CCCAATATAT TCGCGTCATG
TTCGATGAAA TCACTCGAAT TTTGAACCAT TTGATGTGGT TAGGTGCGCA CGCGTTAGAT
ATCGGAGCCA TGACAGTGTT CTTATATGCC TTCAGAGAGC GTGAAGACCT AATGGATTGT
TATGAGGCCG TTTCCGGTGC ACGTATGCAT GCAACCTATT ACCGTCCAGG TGGTGTGTAT
CGTGACTTGC CTGATACGAT GGCTAAGTAT GAAGAATCAA AATGGCACTC TGGTAAAAAA
TTAGATCAGT TGAATGAAAC GCGCGAAGGC TCTTTACTCG ACTTCATTGA AGCCTTTACA
GAACGATTCC CTGGTTATGT GGATGAATAT GAAACGCTGT TAACGGATAA CCGTATTTGG
AAGCAAAGAA CCGTTGATAT CGGAATTGTT TCACCAGAAA GAGCTTTACA GTTAGGATTC
ACAGGGCCTA TGTTGCGTGG GTCAGGCATC GCTTGGGATT TACGTAAGAA ACAACCTTAT
GAAGTCTATG ACAAATTAGA TTTTGATATT CCCGTTGGCG CAACAGGTGA CTGTTATGAC
CGTTATTTGG TGCGTGTGGC AGAAATGCGT GAATCCAATA AGATTATTAA ACAATGTGTG
AAGTGGCTAA AAGAAAACCC AGGCCCGGTT ATTTCGGATG ACCATAAAGT CACACCGCCT
TCACGTGAAG ACGCTAAATC AAACATGGAA GCCTTGATTC ATCACTTTAA ACTGTTTACA
GAAGGGTATT CTGTACCAGA AGGTGAGTCT TATACCGCTG TTGAGCATCC GAAAGGTGAG
TTTGGTATTT ATATGGTGTC GGACGGCGCA AATAAACCTT ACCGTCTAAA AGTGAGAGCA
CCAGGTTTTG CTCACTTAGC TTCGTTAGAT GAAATGGCCA AAGGCCATAT GATTGCAGAC
GTGGTGGCCA TTATCGGAAC ACAAGATATT GTATTTGGGG AGGTTGATCG ATGA
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| Protein sequence | MSEIRNYTLN FGPQHPSAHG VLRLVLELDG ETIVRSDPHI GLLHRGTEKL AEYKPFNQSI
GYMDRLDYVS MMANEHAYVM GIEKMLGIEV PERAQYIRVM FDEITRILNH LMWLGAHALD
IGAMTVFLYA FREREDLMDC YEAVSGARMH ATYYRPGGVY RDLPDTMAKY EESKWHSGKK
LDQLNETREG SLLDFIEAFT ERFPGYVDEY ETLLTDNRIW KQRTVDIGIV SPERALQLGF
TGPMLRGSGI AWDLRKKQPY EVYDKLDFDI PVGATGDCYD RYLVRVAEMR ESNKIIKQCV
KWLKENPGPV ISDDHKVTPP SREDAKSNME ALIHHFKLFT EGYSVPEGES YTAVEHPKGE
FGIYMVSDGA NKPYRLKVRA PGFAHLASLD EMAKGHMIAD VVAIIGTQDI VFGEVDR
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