Gene Tcr_0813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0813 
Symbol 
ID3762140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp885919 
End bp886746 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content42% 
IMG OID637785531 
Productdihydropteroate synthase 
Protein accessionYP_391083 
Protein GI78485158 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0294] Dihydropteroate synthase and related enzymes 
TIGRFAM ID[TIGR01496] dihydropteroate synthase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.00164146 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAATTAA CTGAAAAATT ACATGATCCA GCGTTGGGTC ATCCATTGGT GATGGGTATT 
TTAAATGTCA CGCCGGATTC TTTTTCCGAT GGTGGACAAT TCAACTCAAT GGAGGCTATC
AAACAGCAGG TAGAAAAAAT GTCGAGCGCT GGAGTCGACA TTATTGATAT TGGTGGAGAA
TCAACCAGGC CTGGCGCAAA AGAAGTCAGT TTACAAGAAG AATTGGATCG TGTTTTGCCT
GCAATTGAAG TGGTTAAAGC TGTTTCGGAT GCTTATATTT CCATTGATAC CTATAAACCT
GAGGTGATGA AAGAATCCAC CAAGCTAACG ATCGATATGA TTAACGATGT GAATGCCTTG
AAGGCCGACG GTGCGATTGA AATTGTTCGA GAATCCGGTG TTATGGCTTG TTTAATGCAT
AAGCAGGGTA ATCCAAAAGA CATGCAGCAG GCGCCAGACT ATGAAAAAGG CGTTTTTGAA
GACGTGTATC AGTTTTTGTC TACACAAAGT GCGCACTGTG TAGAAAAAGG CATTCAGCCG
CAAAATATTG TGATTGATCC AGGGTTTGGG TTTGGTAAAA AAATACACCA TAATGTTGAG
CTTTTTGAGA ATTTAGAGGC GTTTTCTGAA TTACAATACC CGCTTCTTGT TGGGGTGTCG
CGAAAAACCA TGATCGGTGA ATTGTTGAAT GGTGTGCCTG TTGACGAGAG AATGATTGGA
AGTGTATCTG CAGCCGTTTT AGCCAGCTTA AAAGGCGCGA AGATTTTAAG AGTGCATGAT
GTCAAAGAAA CAACGCAAGC GCTAAAAGTT GCAATGGCTT TGCTTTAA
 
Protein sequence
MKLTEKLHDP ALGHPLVMGI LNVTPDSFSD GGQFNSMEAI KQQVEKMSSA GVDIIDIGGE 
STRPGAKEVS LQEELDRVLP AIEVVKAVSD AYISIDTYKP EVMKESTKLT IDMINDVNAL
KADGAIEIVR ESGVMACLMH KQGNPKDMQQ APDYEKGVFE DVYQFLSTQS AHCVEKGIQP
QNIVIDPGFG FGKKIHHNVE LFENLEAFSE LQYPLLVGVS RKTMIGELLN GVPVDERMIG
SVSAAVLASL KGAKILRVHD VKETTQALKV AMALL