Gene Tcr_0811 details

Gene Information

• Locus tag: Tcr_0811
• ID: 3760425
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thiomicrospira crunogena XCL-2
• Kingdom: Bacteria
• Replicon accession: NC_007520
• Strand: +
• Start bp: 883130
• End bp: 883750
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 637785529
• Product: ribosomal RNA methyltransferase RrmJ/FtsJ
• Protein accession: YP_391081
• Protein GI: 78485156
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0293] 23S rRNA methylase
• TIGRFAM ID: [TIGR00438] cell division protein FtsJ

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 0.183107
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAGAA GTAAATCGAG TGCAGGATGG CTAAAAGAGC ATTTTGACGA CTACTATGTA 
AATAAGGCGA AACAGGACGG CTGGCGTTCT CGTGCGATTT ATAAGTTACA AGAGATTGAT 
GAAAAGGATC AGTTGTTTTC CAAAGGGATG ACGGTTATTG ATTTGGGCGC CGCACCAGGG 
GGGTGGTCAC AATGGACTAC TCACCAAACA GGGGATGAAG GACGTGTCTT TGCATTGGAT 
ATTTTGCCGG TTGAGCCATT TGCCGGAGTG ACCTTTATAC AAGGCGATTT TCAGGAAGAC 
GATGTTTACC AGTCGCTTTT AGATGCTTTG GATGGGCGAG AAGTGGATTT GGTTATGTCG 
GATATGGCTC CGAATATGAC AGGTAATAAA GGGGTGGATA TCCCAAGAGC AATGTATTTA 
GTAGAGCTTT GTGTTGATTT GGCGGATCAA GTTCTCAAAC CCAATGGCGA TTTGTTGATG 
AAAGTCTTTC AGGGTGAAGG ATACGATCAG TTATTAAAAA GTTTGCGTGA AAAATATCAA 
AAAGTATTAA CGCGTAAACC AAAAGCTTCG CGCCCTAGAA GTAAGGAGAT TTATCTATTG 
GCGCGCGGCA AAAAAGCTTA A 

 

Protein sequence

MARSKSSAGW LKEHFDDYYV NKAKQDGWRS RAIYKLQEID EKDQLFSKGM TVIDLGAAPG 
GWSQWTTHQT GDEGRVFALD ILPVEPFAGV TFIQGDFQED DVYQSLLDAL DGREVDLVMS 
DMAPNMTGNK GVDIPRAMYL VELCVDLADQ VLKPNGDLLM KVFQGEGYDQ LLKSLREKYQ 
KVLTRKPKAS RPRSKEIYLL ARGKKA