Gene Tcr_0801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0801 
Symbol 
ID3760415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp873536 
End bp874324 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content46% 
IMG OID637785519 
ProducttRNA pseudouridine synthase A 
Protein accessionYP_391071 
Protein GI78485146 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0101] Pseudouridylate synthase 
TIGRFAM ID[TIGR00071] pseudouridylate synthase I 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0247033 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTTAT TGGCGATTGG TATTGAATAC CAAGGCACCG CTTATTGTGG TTGGCAGCAT 
CAGAAACATT GCGATTCTGT TCAGCAACAA CTTGAAAAGG CATTATCGTA TATCGCTGAC
GAACCAATTG GTTTGAATTG TGCGGGTAGA ACCGATACAG GTGTGCATGC GATTGGGCAG
ATCGCGCATT TTGAAACGAA TGCCAGTCGG CCGGATAAAG CATGGATTCA AGGCGTTAAC
ACCCAGTTAC CCAATGACAT TCGGGTAACA TGGGTGAAAC CGATGCCAGA GGATTTTCAC
GCACGGTTTT CTGCTGTTGC CCGGCAATAC CGTTATGTCA TATTTAATCG ACCCGTTCAT
TCTGCCATTT TAGCCAATCG TGTGACTTGG GAGAATCGTC CTTTAGATGT GAAAAAAATG
CATGCCGCTG CTCAGGATTT ATTGGGTGAA AATGATTTTT CATCTTTTCG CGCAGCGGGT
TGCCAAGCCT CTCACGCCAA TCGTAATGTA CAGTATTTGC AGGTGTCACG CCAAGGCAAT
TTTGTCTTTG TTGATATTCA AGCCAATGCT TTTTTGCACC ATATGGTTCG AAACATTGTC
GGTACCTTGT TGGAGGTGGG GCGATTGGAC AAACCCGTTG AATGGGTATC GGAGTTGCTC
AAGAAGCAAG ACCGAACTCA AGCCGGCATG ACAGCGCCAG CGGCAGGGTT GTATTTTGTG
AATGCACTGT ATCCGGAATC GTTCGAACTA CCACGAGTTG TTTTGGATGA ATTACTTTGG
CAAGCTTAA
 
Protein sequence
MTLLAIGIEY QGTAYCGWQH QKHCDSVQQQ LEKALSYIAD EPIGLNCAGR TDTGVHAIGQ 
IAHFETNASR PDKAWIQGVN TQLPNDIRVT WVKPMPEDFH ARFSAVARQY RYVIFNRPVH
SAILANRVTW ENRPLDVKKM HAAAQDLLGE NDFSSFRAAG CQASHANRNV QYLQVSRQGN
FVFVDIQANA FLHHMVRNIV GTLLEVGRLD KPVEWVSELL KKQDRTQAGM TAPAAGLYFV
NALYPESFEL PRVVLDELLW QA