Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0800 |
Symbol | |
ID | 3760414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 872508 |
End bp | 873530 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637785518 |
Product | aspartate-semialdehyde dehydrogenase, USG-1 related |
Protein accession | YP_391070 |
Protein GI | 78485145 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0136] Aspartate-semialdehyde dehydrogenase |
TIGRFAM ID | [TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.000180575 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAAAC AGTATGATAT TGCCGTTGTA GGTGCAACGG GTGCCGTAGG TGAAACAATT TTAAAAGTAC TTGAAGAGCG TAATTTCCCA GTTCGTAATT TATATCCGCT TGCCAGCAGC CGTTCTGCGG GTAAAAAGCT GGAGTTTAAT GGGGGTTGGG TTGAGATTCA GGATTTGGCA ACGTTTGATT TTTCAAAAGT TCAAATCGGA TTATTCTCTC CGGGCGCCAG TGTTTCTAGA GAATATGCAC CGAAAGCCGC CGCGGCAGGG TGTATTGTGG TCGATAATAC ATCGGAATTT CGTTACGACG ACGACATTCC TTTAGTGGTT CCTGAAGTGA ACCCTGGTGC GGTTGCAGGG TATAAAAGTC GAGGCATTAT CGCAAACCCT AATTGTTCAA CCATTCAAAT GATGGTGGCT TTAAAACCTA TTTATGATGC TGTAGGCATT GAACGTATCA ACGTATCAAC CTATCAAGCG GTTTCTGGTT CGGGTAAAGA AGCGATTGAT GAATTGGCAA CTCAAACGGC TAATCTGTTG AATATGAAGC CGGTTGAAGC AAAAGTTTAT CCTAAGCAGA TCGCATTTAA CTGTATTCCG CAAATTGATG TGTTCCAAGA TAATGGCTAC ACCAAAGAAG AAATGAAAAT GGTTTGGGAA ACGAAAAAGA TCATGGAAGA TGAATCGATT CTAGTTAACC CAACAGCGGT ACGTGTACCT GTCTTCTTTG GTCACAGTGA AGCGATTCAC TTGGAAACAA AAGAAAAGAT AACAGCGGAA CAGGCAAAAG AATTATTTAA AAAATCTGAC GGAATTGTGC TGATTGATGA GCATGTTGAC GGCGGTTACC CAACGGCTGT CACCGATGCC GCTAATACGA ACCCGGTTTA TATTGGACGC GTACGTGAAG ACATTTCTTT TGAAAAAGGC TTGAACTTAT GGGTTGTGGC AGACAACGTG CGTAAAGGTG CGGCTACAAA TACGGTTCAA ATTGCTGAGC TGTTGATCAA AGATCATATC TAA
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Protein sequence | MTKQYDIAVV GATGAVGETI LKVLEERNFP VRNLYPLASS RSAGKKLEFN GGWVEIQDLA TFDFSKVQIG LFSPGASVSR EYAPKAAAAG CIVVDNTSEF RYDDDIPLVV PEVNPGAVAG YKSRGIIANP NCSTIQMMVA LKPIYDAVGI ERINVSTYQA VSGSGKEAID ELATQTANLL NMKPVEAKVY PKQIAFNCIP QIDVFQDNGY TKEEMKMVWE TKKIMEDESI LVNPTAVRVP VFFGHSEAIH LETKEKITAE QAKELFKKSD GIVLIDEHVD GGYPTAVTDA ANTNPVYIGR VREDISFEKG LNLWVVADNV RKGAATNTVQ IAELLIKDHI
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