Gene Tcr_0800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0800 
Symbol 
ID3760414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp872508 
End bp873530 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content43% 
IMG OID637785518 
Productaspartate-semialdehyde dehydrogenase, USG-1 related 
Protein accessionYP_391070 
Protein GI78485145 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000180575 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAAAC AGTATGATAT TGCCGTTGTA GGTGCAACGG GTGCCGTAGG TGAAACAATT 
TTAAAAGTAC TTGAAGAGCG TAATTTCCCA GTTCGTAATT TATATCCGCT TGCCAGCAGC
CGTTCTGCGG GTAAAAAGCT GGAGTTTAAT GGGGGTTGGG TTGAGATTCA GGATTTGGCA
ACGTTTGATT TTTCAAAAGT TCAAATCGGA TTATTCTCTC CGGGCGCCAG TGTTTCTAGA
GAATATGCAC CGAAAGCCGC CGCGGCAGGG TGTATTGTGG TCGATAATAC ATCGGAATTT
CGTTACGACG ACGACATTCC TTTAGTGGTT CCTGAAGTGA ACCCTGGTGC GGTTGCAGGG
TATAAAAGTC GAGGCATTAT CGCAAACCCT AATTGTTCAA CCATTCAAAT GATGGTGGCT
TTAAAACCTA TTTATGATGC TGTAGGCATT GAACGTATCA ACGTATCAAC CTATCAAGCG
GTTTCTGGTT CGGGTAAAGA AGCGATTGAT GAATTGGCAA CTCAAACGGC TAATCTGTTG
AATATGAAGC CGGTTGAAGC AAAAGTTTAT CCTAAGCAGA TCGCATTTAA CTGTATTCCG
CAAATTGATG TGTTCCAAGA TAATGGCTAC ACCAAAGAAG AAATGAAAAT GGTTTGGGAA
ACGAAAAAGA TCATGGAAGA TGAATCGATT CTAGTTAACC CAACAGCGGT ACGTGTACCT
GTCTTCTTTG GTCACAGTGA AGCGATTCAC TTGGAAACAA AAGAAAAGAT AACAGCGGAA
CAGGCAAAAG AATTATTTAA AAAATCTGAC GGAATTGTGC TGATTGATGA GCATGTTGAC
GGCGGTTACC CAACGGCTGT CACCGATGCC GCTAATACGA ACCCGGTTTA TATTGGACGC
GTACGTGAAG ACATTTCTTT TGAAAAAGGC TTGAACTTAT GGGTTGTGGC AGACAACGTG
CGTAAAGGTG CGGCTACAAA TACGGTTCAA ATTGCTGAGC TGTTGATCAA AGATCATATC
TAA
 
Protein sequence
MTKQYDIAVV GATGAVGETI LKVLEERNFP VRNLYPLASS RSAGKKLEFN GGWVEIQDLA 
TFDFSKVQIG LFSPGASVSR EYAPKAAAAG CIVVDNTSEF RYDDDIPLVV PEVNPGAVAG
YKSRGIIANP NCSTIQMMVA LKPIYDAVGI ERINVSTYQA VSGSGKEAID ELATQTANLL
NMKPVEAKVY PKQIAFNCIP QIDVFQDNGY TKEEMKMVWE TKKIMEDESI LVNPTAVRVP
VFFGHSEAIH LETKEKITAE QAKELFKKSD GIVLIDEHVD GGYPTAVTDA ANTNPVYIGR
VREDISFEKG LNLWVVADNV RKGAATNTVQ IAELLIKDHI