Gene Tcr_0797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0797 
Symbol 
ID3760411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand+ 
Start bp869968 
End bp871041 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content46% 
IMG OID637785515 
Product3-isopropylmalate dehydrogenase 
Protein accessionYP_391067 
Protein GI78485142 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0473] Isocitrate/isopropylmalate dehydrogenase 
TIGRFAM ID[TIGR00169] 3-isopropylmalate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.000000000426941 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACAAG AAGTATTGAT TTTACCCGGA GACGGGATTG GACCGGAAAT TACAGCCGAA 
GCCGTTAAAG TTTTGGAAGC CCTGCAACAA AAAGATAATT TGGATATCAG CATGACACAC 
GATCTAGTCG GTGGCGCTGC TTATGACCAG CATGGTGTGC CTTTAGCAGA AGAAACGCTA 
GAGAAGGCCA AGCAATCTGA TGCCATTTTG TTAGGTGCGG TTGGCGGTTA TCAATGGGAA 
TCATTGGATA TTTCGGTGCG TCCTGAAAAA GGATTGCTGG CATTACGTTC TAATTTAGAG 
TTGTTCGCCA ATCTAAGACC GGCGTATTTG TTTCCGCAAT TGGCTGATGC GTCGACCTTG 
AAGCCTGAAG TGGTGGCTGG GTTGGATATT CTGATTGTTC GTGAATTAAC CGGGGGAATT 
TATTTTGGAC AGCCTCGTGG TATCCGTACA TTAGACAATG GAGAGCGCCA AGGATATAAC 
ACCTATGTTT ACTCAGAATC CGAAATCAAA CGTATCGCAC ATGTGGCTTT TGATGCGGCC 
ATGAAGCGTA ACAAAAAGCT GTGTTCTGTT GATAAGGCTA ATGTGCTGGA AGTGACGGAG 
ATGTGGCGTG AGATTGTGGA TGAGGTGGCC AAAGAATATC CAGAAGTAGA GGTTCAACAC 
ATGTATGTGG ATAACGCTGC GATGCAGTTG GTGCTTAACC CAAAACAATT TGACGTGATG 
GTGACCGGTA ATATGTTTGG TGACATCCTT TCTGATGAAG CGTCTATGTT GACCGGATCG 
ATTGGTATGT TGGCTTCGGC GTCTTTGGAT GCGAATAACA AAGGGATGTA TGAACCAAGT 
CATGGTTCAG CACCGGATAT TGCAGGGCAA AACATTGCGA ATCCGCTGGC GACAATTTTG 
TCTGCGGCCA TGATGTTACG TTACAGCTTG AACCGTGAAG ATTTGGCTTT GAAGATTGAA 
ACTGCTGTCA GTAAAGTGCT GGACCAAGGC TTAAGAACCG GGGATATTTG GTCAGAAGGA 
TTAACGAAGG TATCGACATC AGAAATGGGC GATGCGGTCG TCGCTGCACT GTAA
 
Protein sequence
MTQEVLILPG DGIGPEITAE AVKVLEALQQ KDNLDISMTH DLVGGAAYDQ HGVPLAEETL 
EKAKQSDAIL LGAVGGYQWE SLDISVRPEK GLLALRSNLE LFANLRPAYL FPQLADASTL 
KPEVVAGLDI LIVRELTGGI YFGQPRGIRT LDNGERQGYN TYVYSESEIK RIAHVAFDAA 
MKRNKKLCSV DKANVLEVTE MWREIVDEVA KEYPEVEVQH MYVDNAAMQL VLNPKQFDVM 
VTGNMFGDIL SDEASMLTGS IGMLASASLD ANNKGMYEPS HGSAPDIAGQ NIANPLATIL 
SAAMMLRYSL NREDLALKIE TAVSKVLDQG LRTGDIWSEG LTKVSTSEMG DAVVAAL