Gene Tcr_0788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0788 
Symbol 
ID3761712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand+ 
Start bp862324 
End bp862761 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content42% 
IMG OID637785506 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_391058 
Protein GI78485133 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGTTAA CCAAACAAAC CGATTTTGCG TTTCGAGTGC TGATTTACTT GGCCTCAAAA 
AAAACGGGCG AGTTGTCGAA TATTCAGATG ATTTCCGACC GATATGAGAT TTCTAAAAGC 
CACCTGATGA AAGTGGTTCA AAAATTGGTA AGCCACGGCT TGGTGACCTC CGTTAGAGGT 
CAACACGGCG GCATTTATCT GGAAAAAGAA CTTCATGAGA TTACCTTGAG AGAGGTGATT 
GAGCTGATGG AAGCGACGTT AACCCCGGTG AATTGCGATG AACCGGGGTG CAAAATTAAA 
GAGGTTTGCC AGTTAAAGAT TTATCTGGTT GAAGCTCAGA ATCAATATCT TACTTATCTG 
GAACAATTTA CGCTGGCCGA TATTGTCAAT GACACGATTC GGCAGGAAAT CTTTCCTGAT 
ATGATTCGCA TCAGTTGA
 
Protein sequence
MQLTKQTDFA FRVLIYLASK KTGELSNIQM ISDRYEISKS HLMKVVQKLV SHGLVTSVRG 
QHGGIYLEKE LHEITLREVI ELMEATLTPV NCDEPGCKIK EVCQLKIYLV EAQNQYLTYL 
EQFTLADIVN DTIRQEIFPD MIRIS