| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0776 |
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| Symbol | |
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| ID | 3761700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 848187 |
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| End bp | 850781 |
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| Gene Length | 2595 bp |
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| Protein Length | 864 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637785494 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_391046 |
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| Protein GI | 78485121 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCACCG GTGCATTGAT TACAGCGCTA GCGATTTTTT CCATTACGAT GTTTGCGGCA
TCGCAAATTT TTATTGAAAG CCTTTCCACA CAAAGCGAAA AAAATGCAAC CACGCTCAGC
CAATTATCCT TCGATAATAT GTATCAAATT ATGAGTAAAG GCTGGAGTCG TGAACAGTTA
TTGGATTTTC GTCAAGACCT TAAGCGTACC TATAAAGAAC AAAACTTAGA ATTTTCTATG
TACCGGGCCG ATATTGTTAA CCAGCAGTTT GGTTTTTTAG CGTCTGATGT CAATGACGAT
ATGCGTCCGC TCTTTCAAGA AGTCTTGTTG TCCAAAGAAA AAAAGGTGAT TGAAAAAAAT
AACCATATTC GTATTCTCAA GCCTCTGCAA GCACGTGATA CCTGCCTTAA ATGCCATACG
CTTGCTCAAA AAGGTGATGT CCTTGGCATT ATGGGCATTG AACAAAATGT GGGCGATGTG
ATGCGTTCCG CACGAAATGA ATTTTTATTA TTGATGTTGA TACTGACTCC CATTCCGGTT
GTGTTGGCAC TTTGGGTGGG GAAGCGTTTT TCCAGAAGCC TGGTGAAAAG TGTGGATGAG
TTGGACAATC AGATCGTATC GATTCAGCAG ATCGATGATT TAAAGAAATT CGCCCATGGC
CGTTCCGTTT TTGATTACGA AGAGTTCGAT CAATTAAACC GCAGTTTGAA TCAACTTGGT
GACAAAATAA AGCACATCGC CATTGACCGA GACATTCTCG ATTTTGAAAT TCAGTTGCTG
GATAAGCTGG TGTTGTCTTC TGAACTCATT AAGGATTGGA AACAGCATAT TTGTTTATTG
ATGAATGAAA TCAATCACAT CTTGCCGCTT TATACTATGT TTGTGGTGTT CAGAACAGAT
GATGCCGAAC AATATGTGAT TGAAGTTTTC TGGCTGGGTC ACCCTTCTCA AGAAGCGCAG
GAAGAGTTGG AAGTGCACGC AAAAGAATTG TTGGATAGGG TCTCAATCTT TGAAAAAGGC
TCGGTCTTTA ATGTACACCA CACTTACGCT TCTCATGAAC CGCTGGACAT TAAAAGTGCC
ATTCAAACGC AAAGTAAGAG CCTTATCCTT GATACGCCAA AAATCGGTGG TGTGGTTGGG
TTAGGGGTGG AAACCTTTCC TCCGAAAGAG TCTTCTCGCT CGGTGGTGGT GGAAAGCATT
TTGACCACAT TGGTGAATGT GATTGGATCG ATTAAAGCAA TTAATAAATT TACCAAGGAA
TTGGAGTATT ACGCCACGCG AGACCCTTTG ACGCACTTGT TCAATCAACG TGTGTTCCAT
GAGTTGTTAG CCTACGAAGT GACTCGTGCG CATGCACACC GTTATTCTTT TGGGTTGCTG
ATGATCGATT TTGATAACTT CAAACTGATT AACGATCAAT ACGGGCATGC TTTTGGAGAT
GAAGTGTTAC AAGCTTTTGC CAATGCCATA CAACAGGTTC TAAGAGAAGG CGACATTTTT
GCCCGTTATG GCGGGGATGA ATTTTGTGTG ATTTTGCCGG AAAGTCAGAT GGATGATGTT
AAATCCATGT CTTATAAAAT TCTGAATGCG ACTTCCGATT TGAAAATGAT AGAGCCAAAA
GGAAGCGTGG TTACGATGAC GTGTTCGGTC GGTGTGAGTC TTTATCCTGA TCATGCTAAG
GATAAAGAAG ACCTCTTTAT GGTGGCCGAT AATATGCTGT ATCGTGTGAA AGATAATGGC
AAGAATTCGT TATCTTATCC CGAGGAAGAA GACCTGGTTG AAGTCTATAA AGAATCCAAT
GATCAAAGTT TGTTTATTAT GCATTCGTTG GAAACCGGTG AGCCTATTGA ACCGCATTAT
CAACCGATTA TCTGTATGGA AACGGGCGAA ATTGCTGTGC ATGAATTGTT GATGCGCTTA
AGACAAAACG GTGAGTTGAT CAGTGCAAGT CGGTTTATTG AAACGGCCGA GCATATGGGG
CTGGTGAATC AGATGGACTT GGTTTTAATC GATAAGGCTT TGGCACAGGT TCAAATATCG
GACTATCGTG GTTTGGTGTT TATTAACTTG TCGCCCAAAG CCATTGTGGC CAGTGAGTTT
ATTGCCAAGA TAAAAGGGTT AACCGAAAAG TATGAAGTTC ATCATGAACG GATCGTTTTT
GAAATTACTG AGCGTGAGAC GGTGCATAAT ATAGCGTTGC TTGAGAAATT CGTTCGAGAG
CTACGCTCGG AAGGCTTCCG GTTTGCCATT GATGATTTCG GTTCAGGCTT TTCTTCTTTT
CAATATCTAA AACGCTTCCC CGTGGACTTC ATTAAAATTG AAGGGGAGTT CATCAATAAT
ATGTCTAAAA ACAAAATCGA TTTGGCGTTT GTGGAGAGCG CTGTGTCGAT GGCGACGTCT
TTGGGAATTA AAACCATTGC AGAGTTTATT GAAAATAAAG AGACCCTGTT GTTGGTTAAA
CAGCTTGGTA TCGATTACGC ACAAGGTTTC TTATTGGCAA CACCCCAACC AGAGTTCTTA
AATGAATTGA ACGCGGATTT GGTGTCCTTG ATTCAACAAG AAGAGACCAA GCCAAAAAAA
GACCACACCT ATTAA
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| Protein sequence | MLTGALITAL AIFSITMFAA SQIFIESLST QSEKNATTLS QLSFDNMYQI MSKGWSREQL
LDFRQDLKRT YKEQNLEFSM YRADIVNQQF GFLASDVNDD MRPLFQEVLL SKEKKVIEKN
NHIRILKPLQ ARDTCLKCHT LAQKGDVLGI MGIEQNVGDV MRSARNEFLL LMLILTPIPV
VLALWVGKRF SRSLVKSVDE LDNQIVSIQQ IDDLKKFAHG RSVFDYEEFD QLNRSLNQLG
DKIKHIAIDR DILDFEIQLL DKLVLSSELI KDWKQHICLL MNEINHILPL YTMFVVFRTD
DAEQYVIEVF WLGHPSQEAQ EELEVHAKEL LDRVSIFEKG SVFNVHHTYA SHEPLDIKSA
IQTQSKSLIL DTPKIGGVVG LGVETFPPKE SSRSVVVESI LTTLVNVIGS IKAINKFTKE
LEYYATRDPL THLFNQRVFH ELLAYEVTRA HAHRYSFGLL MIDFDNFKLI NDQYGHAFGD
EVLQAFANAI QQVLREGDIF ARYGGDEFCV ILPESQMDDV KSMSYKILNA TSDLKMIEPK
GSVVTMTCSV GVSLYPDHAK DKEDLFMVAD NMLYRVKDNG KNSLSYPEEE DLVEVYKESN
DQSLFIMHSL ETGEPIEPHY QPIICMETGE IAVHELLMRL RQNGELISAS RFIETAEHMG
LVNQMDLVLI DKALAQVQIS DYRGLVFINL SPKAIVASEF IAKIKGLTEK YEVHHERIVF
EITERETVHN IALLEKFVRE LRSEGFRFAI DDFGSGFSSF QYLKRFPVDF IKIEGEFINN
MSKNKIDLAF VESAVSMATS LGIKTIAEFI ENKETLLLVK QLGIDYAQGF LLATPQPEFL
NELNADLVSL IQQEETKPKK DHTY
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