Gene Tcr_0765 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0765 
Symbol 
ID3761890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand+ 
Start bp835305 
End bp835958 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content45% 
IMG OID637785481 
Productouter membrane lipoprotein carrier protein LolA 
Protein accessionYP_391035 
Protein GI78485110 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2834] Outer membrane lipoprotein-sorting protein 
TIGRFAM ID[TIGR00547] periplasmic chaperone LolA 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0575497 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTATTGA AAGCACCCAT CAAAAAAATT ATGTCAGGTT TGGTTATGGT TTGCGTACTC 
GCTTCACCTG TACTGTCGTC TGCCAGTGAC CGAGCGAAAC TGTCTGATTT GAATGCATTT 
GTCGCGAATT TAAATACCTT TAGTGCCAAG TTCGAACAAA CTCAGCCGGA CGAAAGTTTG 
TTTGCCATGA ACCGCTCAAC GGGCTATTTT TCCATGAAAC GTCCGGGGCA ATTGCTTTGG 
GTCTATGAAA AACCAGAGCC TCAGAAAATC ATTTCGGATG GTCGTAATGT CTGGGTCTAT 
GATGTCGATT TGGATCAGGC GACGGTACGA GCCTTGGCCA ATGTGGAAGC CGATTTTCCG 
TTAAGCTGGT TGCTTTACAA AGAACCCTTA TCCGAACGAT TCAATATTAT TCCCGGTTCC 
ATTAAGGATG GCGTGAGTTG GTATAATTTA ACCCCGAAAG AAGGCACCTT TTTCCAAAGT 
TTGGAAGTGG CCATTGCCGA TGGCAAAATG GTGCAGATCT GGATGTATCA AAACGCGGAT 
AATGTCACCA AAGTGGTGTT TAACGATATC AGACAAAACC AGCCTGTTCG CGATCAACAA 
TTCGACTTCC AACCACCGAA GGGGGTGGAT GTGATTGGTC AAGCTTTGCC TTAG
 
Protein sequence
MLLKAPIKKI MSGLVMVCVL ASPVLSSASD RAKLSDLNAF VANLNTFSAK FEQTQPDESL 
FAMNRSTGYF SMKRPGQLLW VYEKPEPQKI ISDGRNVWVY DVDLDQATVR ALANVEADFP 
LSWLLYKEPL SERFNIIPGS IKDGVSWYNL TPKEGTFFQS LEVAIADGKM VQIWMYQNAD 
NVTKVVFNDI RQNQPVRDQQ FDFQPPKGVD VIGQALP