Gene Tcr_0744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0744 
Symbol 
ID3760887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp814590 
End bp816683 
Gene Length2094 bp 
Protein Length697 aa 
Translation table11 
GC content45% 
IMG OID637785460 
Productflagellar biosynthesis protein FlhA 
Protein accessionYP_391014 
Protein GI78485089 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1298] Flagellar biosynthesis pathway, component FlhA 
TIGRFAM ID[TIGR01398] flagellar biosynthesis protein FlhA 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTTA ATCAAATACT AAATCAAATA AAAACGTCTT TCAAAAATGG GTTGGGGATC 
CCTATTGCCA TTTTAGCGTT GTTGGCAATG GTTGTTGTAC CGTTACCGCC GTTTTTACTT
GATGTCTTTT TTACCTTTAA TATTGCGCTC TCACTCGTTG TTTTGATGGT GACGTTATAC
GCCAAACGTC CTTTAGATTT TGCTGTGTTT CCAACCATTA TCTTATTAGC TACGCTGTTC
AGGCTGGCGC TTAACATCGC ATCCACTCGT GTTATTTTAT TAGAAGGTCA TAATGGACCT
AGTGCAGCCG GTAATGTCAT CGAGGCCTTT GGTGAATTCG TGATCGGAGG AAATTTCGCT
GTCGGGCTGG TTGTGTTTGC TATCCTTGTC GTCATTAATT TTGTGGTCAT TACCAAAGGG
GCCGGGCGAG TTGCAGAAGT CAGCGCGCGT TTTACCTTGG ATTCGATGCC CGGGAAACAA
ATGGCGATTG ATGCGGACTT GAATGCTGGC TTGATTACAC AGGAAGAAGC ACAGGCCAGA
CGAATAGAAG TCACCTCTGA AGCCGATTTT TATGGCTCCA TGGACGGTGC CAGTAAGTTT
GTCAGAGGGG ATGCGGTTGC CGGTATTGTG ATCTTATTTA TCAACTTGAT TGGTGGGTTT
GCAATAGGGA TGGGGCAGCA TGATATGACC TTTTCCGATG CCATTGAAGT GTATACGTTG
TTAACGTTAG GGGATGGGTT GGTTGCTCAG ATTCCTTCCT TGCTTTTATC GACGGCTACC
GCCATTATTG TGACACGCGT GTCTGGTGAT AAAGAAGACA TGACGCAACA AGTGCAAACG
CAAATGTTTG CCAACCCTAA GGCCTTGGGT ATGACGGCCG GAATTGTTGC GGTGTTCGGT
GTTATCCCTG GGATGCCAAA CCTGGCATTT TTATCGTTTG CAGCGATTGC CGGTGGGGGC
GCTTATTTAA TTTATAAAAA ACAACAAGAA ACACCTTTGC CTGAAGCCGT TTCAACAGAG
GAATCCGAAG CTGAAGAAAC CAGTGCGCCA GAATTGAGCT GGGATGATGT TCAAGCTGTT
GATGTGTTAG GGTTGGAAGT GGGATATCGT CTGATTCCAA TGGTCGATCA AGCGCAAAAT
GGTCAGCTGC TTGAACGGGT TAAAGGAGTG CGTCGTAAAG TTTCTCAAGA ACTTGGGTTT
TTAGTCCCGC CTGTTCACAT TCGTGATAAT TTGGATTTAA AACCTAATCA ATATAAAATT
ATGTTGATGG GTGTTGCATC GGGAGAAGGG GAAGTTTTTT CCGATAAAGA GCTGGCAATC
AACCCTGGAC AAGTTTTTGG TGAAATAGCG GGCACGCCGA CCAAAGACCC AACATTTGGA
CTGGATGCAG TATGGATTGA TGCCTCTGAT CGTGAACAAG CACAGGCTCT CGGTTACACT
GTTGTTGATT CCAGTACCGT CGTGGCGACG CATATCAGTC AAATTATTCA GGATTATGCT
TCCGAGTTAT TGGGACATGA TGAAGCACAA AAACTGCTTG ATAAATTAAA GCAAAACTCA
CCTAAATTGG TGGATGAATT GGTACCGGAT CGTATGTCAT TAGCGGTTGT TGTGAAAGTG
TTGCAAAACT TGTTAATGGA AAAAGTGTCC ATTCGAGACT TGCGGACCAT TTTAGAAACA
TTGACTGAGA GAGCGTCTTC AACTCAGGAC CCAATGGAGT TAACGATGCA TGTTCGAGCC
GCACTAGGTC GATCTATTGT TCAAGGGATT GTGGGCTCAA GTGATGAGTT AAAAGTGATT
ACATTGGAAC CTGGGTTGGA ACAGTTGTTG CTTCAAGCAT CACAGGGGGC ACCTGAAGGG
CAGTTAGCCA TTGAGCCGGG CTTAGCGGAA AGGTTGCACA CGACGTTAAA AGAAGAAGCG
CAGAAAGTAG AAATGACGGG ACAATCAGCG GTGTTATTGG TCGCACCTCA GATTCGAGCG
CAGTTAGCAA GATTGTTTAG ATTCAGCTTG GCGAATTTGC ATATTTTAGC TTATTCAGAA
GTGCCAGAAA ATCGTCGCAT CAGTGTGGTC GCGAATGTGG GGCAAGGGGG ATAG
 
Protein sequence
MDFNQILNQI KTSFKNGLGI PIAILALLAM VVVPLPPFLL DVFFTFNIAL SLVVLMVTLY 
AKRPLDFAVF PTIILLATLF RLALNIASTR VILLEGHNGP SAAGNVIEAF GEFVIGGNFA
VGLVVFAILV VINFVVITKG AGRVAEVSAR FTLDSMPGKQ MAIDADLNAG LITQEEAQAR
RIEVTSEADF YGSMDGASKF VRGDAVAGIV ILFINLIGGF AIGMGQHDMT FSDAIEVYTL
LTLGDGLVAQ IPSLLLSTAT AIIVTRVSGD KEDMTQQVQT QMFANPKALG MTAGIVAVFG
VIPGMPNLAF LSFAAIAGGG AYLIYKKQQE TPLPEAVSTE ESEAEETSAP ELSWDDVQAV
DVLGLEVGYR LIPMVDQAQN GQLLERVKGV RRKVSQELGF LVPPVHIRDN LDLKPNQYKI
MLMGVASGEG EVFSDKELAI NPGQVFGEIA GTPTKDPTFG LDAVWIDASD REQAQALGYT
VVDSSTVVAT HISQIIQDYA SELLGHDEAQ KLLDKLKQNS PKLVDELVPD RMSLAVVVKV
LQNLLMEKVS IRDLRTILET LTERASSTQD PMELTMHVRA ALGRSIVQGI VGSSDELKVI
TLEPGLEQLL LQASQGAPEG QLAIEPGLAE RLHTTLKEEA QKVEMTGQSA VLLVAPQIRA
QLARLFRFSL ANLHILAYSE VPENRRISVV ANVGQGG