Gene Tcr_0733 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0733 
Symbol 
ID3762108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp806621 
End bp807388 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content42% 
IMG OID637785449 
Productpeptidase S26A, signal peptidase I 
Protein accessionYP_391003 
Protein GI78485078 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0681] Signal peptidase I 
TIGRFAM ID[TIGR02227] signal peptidase I, bacterial type 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0000686529 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTTG AGTTAATTTT AGTCATTATC ACGGCCATTA CAGGTGTTGT CGTTTACGTA 
GATAGAACCG TTTGGCGCCC AAAAAGAGAA CGCTCGGTCA CCACCGAAAA AGAACCGCTT
CTTGTTGAGT ATTCGCGTTC TTTATTTCCT GTTTTCCTAA TTGTTCTGGT GCTTCGTTCT
TTTGTAATCG AACCTTTTAG AATACCGTCT GGTTCCATGT ATCCTACGTT GGAAATTGGT
GATTTTATTG TTGTGAATAA GTTTGCCTAC GGTATTAAGT TACCTGTGAC ACAAACGAAA
ATTTTGCCAA TTGGGGAGCC AAAGCGAGGG GATGTTGTTG TGTTTAAATA CCCTAAAGAT
CCTGATGTGG ACTACATCAA AAGAGTGGTT GGGCTTCCTG GTGACGAGAT TACTTATATC
GGTAGAACGG TTTTTATTAA TGGTAAGCCT GCCAAACAGA CTTTTCTAGG AGAATACCAA
GGAGAAGGTT CTGGCAAAGT GATGAATGGT GCGTCCCTGA TGCAGGAAAA CTTAGGCGAT
GCGTCACATC TGATTCTGTC GGATAAAGAA AAGACCAGTC AGGATATGAA TACTGTTGTG
GTTCCGGAAG GTTATTATTT CATGATGGGG GATAATCGTG ACCACAGTAA TGACAGCCGT
TTTTGGGGGT TTGTACCCGA GAAGAATCTG AAAGGAAAAG CCTTCGGAAT CTGGATGAAC
TGGGACGATG GTATTCAGTT TGATCGTATA GGAAAGGGAA TCGAATAA
 
Protein sequence
MSFELILVII TAITGVVVYV DRTVWRPKRE RSVTTEKEPL LVEYSRSLFP VFLIVLVLRS 
FVIEPFRIPS GSMYPTLEIG DFIVVNKFAY GIKLPVTQTK ILPIGEPKRG DVVVFKYPKD
PDVDYIKRVV GLPGDEITYI GRTVFINGKP AKQTFLGEYQ GEGSGKVMNG ASLMQENLGD
ASHLILSDKE KTSQDMNTVV VPEGYYFMMG DNRDHSNDSR FWGFVPEKNL KGKAFGIWMN
WDDGIQFDRI GKGIE