| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0726 |
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| Symbol | lysS |
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| ID | 3762101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 797526 |
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| End bp | 799040 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637785442 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_390996 |
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| Protein GI | 78485071 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000000447446 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAACC CTGAAAACCC AACTCCTGAA GTCGATGAAA ATAAAATCAT TGCGGAACGA
CGTGCAAAAT TAGCGGCTCT GCGTGAAGCC GGTCACTCTT ACCCAAATAC GTTTAGACGT
AACGATGTGT CGAGTGACTT GCATGAGCAA TACGATGCCT TCAGTAAAGA AGAACTGGCT
GAGATGGAAC CTGTTCGTGT CAAAGTCGCC GGTCGTATGT TATTGCGTCG TATTATGGGG
AAAGCCAGTT TTGCGACATT GCAGGATACA CATGGTCGTA TTCAGATTTA CGTGACACGT
GATGAGTTGC CTGAAGGGTT TTACAATACG CAATTCAAAA AATGGGACTT AGGGGATATT
GTTGGTGCGG AAGGGTATCT TTTCAAAACC AATACTGGCG AGTTGTCTGT TCATGTTGAA
CATATTGAAT TGATTACCAA ATCGTTGCGT CCTTTACCTG ATAAATTCCA CGGGTTACAA
GATCAGGAAA TCAAATATCG TCAGCGTTAT GTGGATTTGA TCGTGAACGA AGAAAGTCGT
GACACTTTCA TGATCCGTTC AAAAATCGTA CAGCATGTCC GTAACTTTTT AATTAATAAA
GGTTTTATGG AAGTTGAAAC GCCGATGATG CATGTCATTC CGGGTGGGGC GACCGCCAAA
CCATTCCATA CGCATCACAA TGCTTTAGAC ATGCCACTTT ATTTGCGAAT TGCGCCTGAG
CTTTACCTGA AGCGTTTGGT TGTGGGTGGG TTTGAAAAGG TTTTCGAAAT CAATCGAAGC
TTCCGTAATG AAGGCTTGTC GACTCGCCAT AACCCAGAGT TCACCATGGT TGAGTTCTAT
TCGGCCTACA CCGATTACAA TCAATTGATG GATTACACGG AAGAATTGCT AAAAGAATTG
GCAGAACTGA CGGTTGGCTC TTCTCAGGTA CCTTATCAAG GTCAAGTGTT TGATTTCGGG
AAACCCTTTG CGCGCCTAAC GATGAAAGAT GCGATTTTGA AATACAACCC AAGCGCGACG
GCTGAAAATC TAGACGACTT AGAGTCAGCA CGTGCATTGG CGAAATCGTT GAATGTGCAT
GTGGAAGAGA GTTATGGATT AGGCAAAATC TGGACGGAAA TTTTCGAAGA AACGGCGGAA
GAAAAACTGA TGGACCCTAC GTTCATTACT GAGTATCCGG CAGAAGTGTC ACCATTGGCG
CGTCGTAATG ACGATAATCC GTTTATTACC GATCGTTTTG AATTGTTCAT TGGCGGGCGA
GAGTTGGCGA ATGGCTTTAA CGAGTTGAAT GATGCGGAAG ATCAAGCTGA ACGCTTTAAG
GCGCAGGTTG AAGCGAAGGA TGCCGGAGAT GATGAAGCCA TGCATTATGA TGAAGATTAC
ATTGTGGCGC TTGAGCACGG TATGCCGCCA ACAGCAGGGG AAGGAATCGG GATTGACCGC
TTGGTGATGT TGTTTACCGA CAAACCAACC ATTCGCGATG TCTTGTTGTT CCCGCATATG
AGACAAGCCG ATTAA
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| Protein sequence | MANPENPTPE VDENKIIAER RAKLAALREA GHSYPNTFRR NDVSSDLHEQ YDAFSKEELA
EMEPVRVKVA GRMLLRRIMG KASFATLQDT HGRIQIYVTR DELPEGFYNT QFKKWDLGDI
VGAEGYLFKT NTGELSVHVE HIELITKSLR PLPDKFHGLQ DQEIKYRQRY VDLIVNEESR
DTFMIRSKIV QHVRNFLINK GFMEVETPMM HVIPGGATAK PFHTHHNALD MPLYLRIAPE
LYLKRLVVGG FEKVFEINRS FRNEGLSTRH NPEFTMVEFY SAYTDYNQLM DYTEELLKEL
AELTVGSSQV PYQGQVFDFG KPFARLTMKD AILKYNPSAT AENLDDLESA RALAKSLNVH
VEESYGLGKI WTEIFEETAE EKLMDPTFIT EYPAEVSPLA RRNDDNPFIT DRFELFIGGR
ELANGFNELN DAEDQAERFK AQVEAKDAGD DEAMHYDEDY IVALEHGMPP TAGEGIGIDR
LVMLFTDKPT IRDVLLFPHM RQAD
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