Gene Tcr_0720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0720 
Symbol 
ID3760403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp788758 
End bp789531 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content44% 
IMG OID637785433 
ProductTatD-related deoxyribonuclease 
Protein accessionYP_390990 
Protein GI78485065 
COG category[L] Replication, recombination and repair 
COG ID[COG0084] Mg-dependent DNase 
TIGRFAM ID[TIGR00010] hydrolase, TatD family 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTATTG ATTCCCACTG TCATTTAAAT ATTTTGCCAG AAGAAATTGG TACCACGGAA 
GAAGTGATTC AACAGGCTCA CGAGTTGGGC GTTGATAAAA TGATGTGTAT TGCAATTGGT
CCTGAACAAT GGCATGAAGT GTTAGCGTTG GCTGATACCT ATGAAGAAGT GTACGCCGCG
ATCGGAGTTC ACCCGTGTGA AACGAAAGAG GTTGTGGTGA CGGATAACGC TGTACTGGAA
GCCGCGAAGC ACCCAAAGGT ATTGGCGATT GGTGAAGTGG GTCTTGATTA CTATCATTTT
GACGCTGAAA AAGAGGACAT GACTTGGCAG GCCGATCGTT TTCGCCAAAT GATTCGGTTG
GCGATTCAGC TCGACAAGCC TTTGATTATT CATACTCGTT ATTCCACACC GGATTGTTTA
AAAATCTTGA AAGAAGAAGG GGCCGATCAA GTCGGGGGCA TTATGCACTG CTTTGTGGAA
GACATTGAAA CCGCAGAAGC CGCTATGGCC TTAGGGTTTT ATATTTCATT TTCTGGAATC
GTTACCTTTA AAAATGCCAA AGAGCTTAAA GAAGTCGCAA AAGCGGTACC GCTGGATCGA
ATTTTGGTGG AAACCGATGC GCCTTACTTA GCGCCCACTC CGTATCGCGG TAAAACCAAT
CAACCGGGGT ATACGCGGTA TGTGGTTGAA GAAATTGCTC GTCTTAGAGA GTTATCCGTT
GAAGACGTGG CGAATGCAAC AACAGCGAAT TTCAAAAGAC TTTTTAAATT ATGA
 
Protein sequence
MIIDSHCHLN ILPEEIGTTE EVIQQAHELG VDKMMCIAIG PEQWHEVLAL ADTYEEVYAA 
IGVHPCETKE VVVTDNAVLE AAKHPKVLAI GEVGLDYYHF DAEKEDMTWQ ADRFRQMIRL
AIQLDKPLII HTRYSTPDCL KILKEEGADQ VGGIMHCFVE DIETAEAAMA LGFYISFSGI
VTFKNAKELK EVAKAVPLDR ILVETDAPYL APTPYRGKTN QPGYTRYVVE EIARLRELSV
EDVANATTAN FKRLFKL