Gene Tcr_0718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0718 
Symbol 
ID3760401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand+ 
Start bp787006 
End bp787665 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content47% 
IMG OID637785431 
Productthymidylate kinase 
Protein accessionYP_390988 
Protein GI78485063 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0125] Thymidylate kinase 
TIGRFAM ID[TIGR00041] thymidylate kinase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.881728 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAACA CTCAGTCAAA CACGTCTTAT TCCGGCAAGT TTTTAACCCT AGAAGGGACC 
GAAGGGGGAG GGAAATCAAC CAACCTCGTG TTTATTCAGC AGTGGTTGGC CGATCACAAT 
ATTGACGTAG TGGTCACGCG AGAACCCGGT GGAACAGCGG TTAGTGAAGC GGTTCGTGAA 
ATTTTATTGG ATAAACAGTA CAGTGAAATG ACGCCTGAAA CGGAATTGTT ACTAATGTTT 
GCCGCACGAA ATCAGCATTT GCAGGAGAAG ATTCTACCGG CCTTAGCGGC GGGGAAATGG 
GTGGTCTCGG ATCGTTTTAC AGACGCTTCC TATGCCTATC AGGGCGGAGC CAGAGGGATT 
GCCTATGATC GGATTGCAGA GATTGAAAAC TGGGTGCAAC AAGGATGTTA TCCCGACATG 
ACCTTTGTGT TCGACTTGCC TATTGAAGAA GGCATGAAGC GAGTTGCAGC GCGTTCGAAA 
TTATCGGGGC AAGCCATTGA CCGTTTCGAG CAAGAAAAAA TGGAATTTTT TGAAAAAGTT 
CGGGCGGCGT ATTTGTATCG CGCTGAACAG GCACCACAGC GTTATTGTGT TCTGAATGCC 
GCCCGTCCGT TAAATGAAGT GCAAGAGAAA TTAGCGAGTC AGTTAGAATC CTTGTTATGA
 
Protein sequence
MSNTQSNTSY SGKFLTLEGT EGGGKSTNLV FIQQWLADHN IDVVVTREPG GTAVSEAVRE 
ILLDKQYSEM TPETELLLMF AARNQHLQEK ILPALAAGKW VVSDRFTDAS YAYQGGARGI 
AYDRIAEIEN WVQQGCYPDM TFVFDLPIEE GMKRVAARSK LSGQAIDRFE QEKMEFFEKV 
RAAYLYRAEQ APQRYCVLNA ARPLNEVQEK LASQLESLL