| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0709 |
|---|
| Symbol | |
|---|
| ID | 3760392 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | + |
|---|
| Start bp | 777987 |
|---|
| End bp | 779000 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637785422 |
|---|
| Product | fatty acid/phospholipid synthesis protein PlsX |
|---|
| Protein accession | YP_390979 |
|---|
| Protein GI | 78485054 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0416] Fatty acid/phospholipid biosynthesis enzyme |
|---|
| TIGRFAM ID | [TIGR00182] fatty acid/phospholipid synthesis protein PlsX |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.00898231 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGTATTA AAATTGCTAT CGATGCGATG GGTGGCGACC ATGGTATAAA GGTAACAGTA
CCTGCTTCAC TGGAAGCGCT GTCCAAATTT TCTGATATTT CTATTGTGCT GGTAGGGAAT
CAACCCCTGA TTGAAGCCGA ACTTGCAAAT CATAAATATG ATAAAAACCG TTTATCTGTT
GAGCATGCTG AACAAATTGT AGAAATGGAT GATTTACCGT CAAAGGCACT TCGAAATAAA
CGTAAATCTT CGATGAGAAT CGCTTTGAAT CTTGTGAAGG ACGATGTTGC TCAAGCGTGT
GTGAGTGCGG GCAATACTGG TGCTTTGATG GCCGTGTCTA AGTTTGTTTT GAAGACGTTA
CCAGGCATTG ATCGGCCAGC GATTTGTACT CAAATGCCGA CCATGAAAGG GCATGTTCAT
GTGTTGGACT TGGGAGCTAA TGTGGGGGCA GATGGTCAAA GTTTAGCGCA ATTTGCGGTA
ATGGGATCCG TTCTGGCGCA AGCCGTTGAT AGTAATTCTC GCCCTAGAGT TGGTTTGCTT
AATATCGGTG AAGAAGAAAT TAAAGGGCAT CAGCGCATTA AAGATGCCAA TGAGATTCTT
AAGTCTTCTG ATGCAATTAA CTATGTCGGC TATGTAGAAG GCGATGAAAT CTTCAAAGGT
GATGTTGATG TGGTCTCTTG TGATGGGTTT GATGGAAACG TGGCGCTAAA AGCCAGTGAA
GGTGTGGCTA AGATGATTTC TTTTTATCTG CGTGCCGCCT TTAATAAAAA CCTTTTGACC
AAGTTAGCAG GCCTGGTGGT TTATCCTGTT TTGAAAGCTT TTAAGGCAAA AGTGGATCCA
AGGCGTTATA ATGGTGCTTC TTTTTTAGGG CTACGTAAAA TTGTCATCAA AAGTCATGGC
GGAGCAGATG TGTTTTCGTT CTATCATGCC ATTGCGGAAG CGCGTTTGGA AGTGAATAAA
AATGTTCCAG AATTGATCGC AACGGAAGTA AAAGCGATTC TGGAAACACA TTGA
|
|---|
| Protein sequence | MSIKIAIDAM GGDHGIKVTV PASLEALSKF SDISIVLVGN QPLIEAELAN HKYDKNRLSV
EHAEQIVEMD DLPSKALRNK RKSSMRIALN LVKDDVAQAC VSAGNTGALM AVSKFVLKTL
PGIDRPAICT QMPTMKGHVH VLDLGANVGA DGQSLAQFAV MGSVLAQAVD SNSRPRVGLL
NIGEEEIKGH QRIKDANEIL KSSDAINYVG YVEGDEIFKG DVDVVSCDGF DGNVALKASE
GVAKMISFYL RAAFNKNLLT KLAGLVVYPV LKAFKAKVDP RRYNGASFLG LRKIVIKSHG
GADVFSFYHA IAEARLEVNK NVPELIATEV KAILETH
|
|---|
| |