Gene Tcr_0700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0700 
Symbol 
ID3760991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp769796 
End bp770782 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content41% 
IMG OID637785413 
ProductPhage protein D-like 
Protein accessionYP_390970 
Protein GI78485045 
COG category[R] General function prediction only 
COG ID[COG3500] Phage protein D 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTTCTG AATACACGCC TGACTATAAA ATCATCAATA AAGATTCCGG AGCTGATATC 
ACGGCAAAGC TTCGTGAATT TATCGTAAAA ATTACCATCA AAGAAAGCAG TGCCAGTGCG
AATGATACCT TGAGCATCAG TATAGACGCT GCTGGCATTG ATGTTTTTCC AATCTCTGGA
ACAAAAATCG AATGTCATCT TGGTTATAAG GAAACTGGAT TAATTAATTT TGGTGTTTAT
AAGGTAGATA CCAAGTCGGT AAGTGGACCG CCCGAAATCA TCACGGTAAT ATGCGGTGCC
AGCGACTTCA ATGCATTGTA TAAATCTCAG AAATCTCGCC ATTGGGATGA CAAGACACTT
GGCGATATTT TGCGCACAGT GGCTGCATCG AATGGATTAG AATTGGTGAT AGATGATGAC
TTGGCCGCTA TTCAAATCAA GTATATGGTG CAGAAGCAAG AAAGCGATAT GAACTTTGTC
GCACGCCTGG CGACTGAATA TGCTGCCAAC GGCACGATTA AAGCTGGTCA TATCTATTTT
AAGAAAGGGA ATGGTGTTTA TAAAACAGTC AATAGATCAA AGCTTGGCTT GATCAATTAT
CACCTGCAGT GGATAGACAA GCCAAAATAT GACTATGTAG TTGCGACCTG GCAAGACATT
AATTCAAGCA CATCGAATGA AGAAATTTAC GATGGAGAAG GGTTTTCGCT GGAATATTCA
GGAAGTGTGG CCAGAGTACA AGAGATATCA CAAAGTCAGT ATGAAGCAAG AAAGAATGCC
AAAGCATTTT GGCATAAACT TGAAAAGCTG AAATTGAGTG GGTCCATGAT GATGAAAGGA
GATCCGACCA TTGTGAGTGG TCTCGGGTTC AAACTTTCAG AGTTTGGAGA TACCTTTGAT
GGGCGTGTAG TCGAGGTGAA AAACACTACT CATACCTGGC AGCGTAATGG CTACACCACC
AATGCTGTTC TTTCTACGGG TGATTAG
 
Protein sequence
MVSEYTPDYK IINKDSGADI TAKLREFIVK ITIKESSASA NDTLSISIDA AGIDVFPISG 
TKIECHLGYK ETGLINFGVY KVDTKSVSGP PEIITVICGA SDFNALYKSQ KSRHWDDKTL
GDILRTVAAS NGLELVIDDD LAAIQIKYMV QKQESDMNFV ARLATEYAAN GTIKAGHIYF
KKGNGVYKTV NRSKLGLINY HLQWIDKPKY DYVVATWQDI NSSTSNEEIY DGEGFSLEYS
GSVARVQEIS QSQYEARKNA KAFWHKLEKL KLSGSMMMKG DPTIVSGLGF KLSEFGDTFD
GRVVEVKNTT HTWQRNGYTT NAVLSTGD