| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0680 |
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| Symbol | |
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| ID | 3761407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 755162 |
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| End bp | 756553 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637785393 |
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| Product | peptidase S49 |
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| Protein accession | YP_390950 |
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| Protein GI | 78485025 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.415675 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAAAT CAAAAGTCAT GACGGCTATT GCAAAAGTCT TTTCAAAATC TCCATCAACC
CATAGTCTGG TTGGTGAGGT TTACAAGCAT GCAATCGGTA AGCCTTTATT GGTTCATGCA
GAGTTTGGGG CCAACAGCAT TCGCGGTTAT CTGGATGCGC CGGTGGCGAA TGATAATGGC
GATGCACAAG ATGAAGTCAT CAAGCATGAA AATATCGGTG TCATCGATAT TTCAGGGCCG
ATGGTAAACC GTCCTATTCG TGGATTCTGT TCAAATGGTC CAGCAGCTTA TCAGGATATC
AAAGAAGATT TTGATGAACT GATGGCAGAT GACAATATCA AAACCATTGT GCTGCGTTGT
GATTCACCCG GTGGCTCCGC TTCTGGTGTG ATGGACCTTT CAGACCATAT CTTCAATTCA
CGTGGTCAGA AAAAGATTAT CGCCATTGTC GATGACATGG CTTATTCAGC AATGTATGCC
ATCGCTTCTG CATGTGATGA AATCTATGTC AGCCGTACCA GTGGTATTGG CTCGATCGGT
GTGGTGACCT ATCACATCGA CCAAAGCGAA TTTGATAAGA AGATCGGCGT TAAGGTTGAG
TTCATCTATG CCGGTGATAA GAAAGTCGCC GGAAATCCAC ATGAGCCGCT TTCAGATCAG
GCACGTACTG ATATGCAAAC CGAGATTGAC CGTTTGTATG ACATCTTCGT TGCGACTGTC
GCCCGTAACC GAAACATGGA TGAACAAAAG GTACGTGATA CACAGGCAGG TTGCTTCTAT
GGTGATACCG GTATTGCCGT TGGATTAGCA GATAAGCTGG GTACTTTTAG CGAAGTGATT
GGAAACCTGG TATCAGATTC TGGAAATGTT GATGACAGTG CTGATATGTC AGCGCAAGCA
TCAGATGACA ATGAAGCACT TGGAGAAATT CAGGCAAATG CACAGGCTGA AGAATTTGAT
GCCGTACCTG GCGATGAAGA ATCAACGGAT TCGGAAGCAG ATTCGGAAGA AGAAGCAGGC
ATTGCAGCCA CCGCAAACAA TCTACCACAG GTAGGCGCAA GTGTAGTTGG TAACAATACA
CTCAACGCAG AAAGCGAACC GGCTAATGTT GCGCAAACTG AATCGGCTCC TGAAGACAAC
AAGGTTGATG CCAAAGTAAA AACAGATGCT GAAATCAGAG CCATTTGTGC AGCGGCAGGC
ATACCGGAAG CTGCTGGTGA TTACATCTCT GCTGGAACAT CGGTCGATCA AGTAAGAAAA
GACTTGTTTG AAGCGAGTAC CGCAGGAGAA ACGGAAATCA TCACCGCTGC ACCGGTAGCA
GTTCAGCAAG TTTCACAACC GAAAGCGCCG AATGCGAACA ATATCTATGC TAAACGAAAA
AAAGGGAGAT AA
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| Protein sequence | MQKSKVMTAI AKVFSKSPST HSLVGEVYKH AIGKPLLVHA EFGANSIRGY LDAPVANDNG
DAQDEVIKHE NIGVIDISGP MVNRPIRGFC SNGPAAYQDI KEDFDELMAD DNIKTIVLRC
DSPGGSASGV MDLSDHIFNS RGQKKIIAIV DDMAYSAMYA IASACDEIYV SRTSGIGSIG
VVTYHIDQSE FDKKIGVKVE FIYAGDKKVA GNPHEPLSDQ ARTDMQTEID RLYDIFVATV
ARNRNMDEQK VRDTQAGCFY GDTGIAVGLA DKLGTFSEVI GNLVSDSGNV DDSADMSAQA
SDDNEALGEI QANAQAEEFD AVPGDEESTD SEADSEEEAG IAATANNLPQ VGASVVGNNT
LNAESEPANV AQTESAPEDN KVDAKVKTDA EIRAICAAAG IPEAAGDYIS AGTSVDQVRK
DLFEASTAGE TEIITAAPVA VQQVSQPKAP NANNIYAKRK KGR
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