Gene Tcr_0672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0672 
Symbol 
ID3761399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp748484 
End bp750661 
Gene Length2178 bp 
Protein Length725 aa 
Translation table11 
GC content47% 
IMG OID637785385 
ProductPhage terminase GpA 
Protein accessionYP_390942 
Protein GI78485017 
COG category[R] General function prediction only 
COG ID[COG5525] Bacteriophage tail assembly protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACCC TGGCAAAAGC ACAACTCGAA AGAGATAAGA TTAAGGCAAA GCAAGCTCGC 
AAGTCTTATG AGTTGGCTTT GTCAGAATCC ATGAAAACCG AGCAAGCGGA GACGGTTAAA
GCCCTGATCC GAAAGGCGGT TACCAGTCAG TTAAAAAAAC TGACCAAAGA ATTCAGCCAA
GTCGTCGATG GCCAGCAGGA TGAAACGCAA ATTCATTACT TGCTCAGTGA CTACTCGCAC
GACTGGCTCA AGAGCCTTGG CCATCAGGTA AAAAAACAGC TTGATACCAA AGCGCTTGGC
AATACTTTCA AGCAATCTGT CACACCGCGC CAGCTGCTGT CGGTCAGTCA ATGGGCTGAA
AAAAATCGTT ACATGAAAAC AGGCACCAAC TTACCTGGTC CATGGCGCAA TGCCAATGCA
CCGCATGCCG TGGAAATCAT GGACAGTTTG TCAGTTCATT CACCTGTACG CACGGTTACA
TTTATGAAGG CATCCGGTAT CTCCGGCACC GAGATCGGTT TGAATTGGAT CGGCTATGTT
ATCGACTATG CGCAAATGGA CATGATTTTT GTCGTGCCGA CGCTTGAGCT TCGAGACAGA
ACATTCAACC CAAAGCTTAA ACGCTTATTG ACTGAGACAC CTTGCCTGAA TGATTTGTCA
TCCAGTCTAA GTCGAGATGA ATCCAATCGA AAAGACATGC TTGAATTGGG GCCAATGCGA
CTAATCAAAT CTGGTGCAAA CTCTGCAGAA AGCTTCCGTG CCGAGCACGT ACCTTATGCC
TATGGTGATG AAATCGATGC CTTTCCACTG GATGTCGGTG GAGAGGGTGA TCCCGTCACC
CTTATTGAAA ACCGTCAAAA GACCTTTTCA CGCGCCAAGT CGCTTTATAC GTCGACACCA
ACCGAGAGAG ATTTCTCATT GGTTGAAGAC CTGTTTGAGT CAGGTGATCA GCGTTACCGT
TACATTGCAT GCCCTGAGTG CGGTCATCGC CACACACTTG CATTCAAAAA CTTCAGATGG
AAGCTAGATG ACAAGGAACA ACAGGAAGAA GGCGGCAAGA AGATTGTATA TCGCGCATAC
TTCGTTTGTC CATCTTGCGA TGCTGAAATC CATGAACACC AAAAAAATAA GCTTCTTGAT
GAAGCGGTTT GGATTCCAAA TAACCCAAGC GTTACGAAGC ATCGAAGCTA TCACCTGAAT
TCATTTTATA TAAAGTTTGG CCTTGGTTTG ACTTGGAAAG ACATTGCGCA AAAGTGGTTG
GACAGCCAAG GCGATACCAA CAAACTTAAA GCATTTACCA ACACTTATCT TGCCGAAACA
TGGCGAGAAG ATGCTGAGCG TATGGATGCC ATTTTATTGC TATCACGTAT CGAGTCATTC
CCGGAAGAAT TGCCACGTCC AACCACGCGC ATCGCGTTCA CTGACGTGCA GAAAGACCGC
CTTGAGCTTA CTATCATCGA TTTTGAAGAC TCAGAAGAAG CATGGGATCA GCAACATATC
ATACTGCCTG GTGAAACGGC ATTGCCAGAT GTATGGGATT CACTTGATGA AGAACTCGCC
AACCAAAACG TCGTGGTCGC TGGTATCGAT GCCGGTTATA ACACATCCAT GGTCACAGAC
TTCTGCAAAG GCAAAAAATG GTGCATTCCA ACCAAAGGGG TTGGCGGTGA GCATCGGCCA
CTGGTAGAAG ACAAGGTAAA GCGTAACCAG CGCCTGCGCC GCCGCCGTAA AAAAGGCATG
CCAATTGAAC CAATCGGAAC AGACCAAGGC AAGGCACTTT TATTCGCGCG CCTAAACTTA
AAACCAAATA CAGAGCGCGT TATCGATGAA GAAAGCGGCG AGATTATCGA AACGATCTAT
CACTCAACAC CTGGTTATAT CCACTTTAAC AACGACCCAA GCCTAGATGA TGAATATTTC
AACCAGCTGA CAGCTGAAGA ACTGCAAACC AAAAAGCGTG CCGGCCGTGA ATATCGCCAA
TGGGTCAAGA CTCGACCACG TAATGAAGCA TTGGATTGCT TTATCGGCGC TTTGGCTATC
TTCCGCATGG CGAAAGAAAT GCCAACCATA CGCCGCAAAA AGTTTGTAGA ACAAACATCT
CAAGAAGAAG GCAACGCTGA GCAACAATCA CAACCAACCA AAAAACCAAT CCGTCAAAGA
CGCAAGCTGA GAATATAG
 
Protein sequence
MATLAKAQLE RDKIKAKQAR KSYELALSES MKTEQAETVK ALIRKAVTSQ LKKLTKEFSQ 
VVDGQQDETQ IHYLLSDYSH DWLKSLGHQV KKQLDTKALG NTFKQSVTPR QLLSVSQWAE
KNRYMKTGTN LPGPWRNANA PHAVEIMDSL SVHSPVRTVT FMKASGISGT EIGLNWIGYV
IDYAQMDMIF VVPTLELRDR TFNPKLKRLL TETPCLNDLS SSLSRDESNR KDMLELGPMR
LIKSGANSAE SFRAEHVPYA YGDEIDAFPL DVGGEGDPVT LIENRQKTFS RAKSLYTSTP
TERDFSLVED LFESGDQRYR YIACPECGHR HTLAFKNFRW KLDDKEQQEE GGKKIVYRAY
FVCPSCDAEI HEHQKNKLLD EAVWIPNNPS VTKHRSYHLN SFYIKFGLGL TWKDIAQKWL
DSQGDTNKLK AFTNTYLAET WREDAERMDA ILLLSRIESF PEELPRPTTR IAFTDVQKDR
LELTIIDFED SEEAWDQQHI ILPGETALPD VWDSLDEELA NQNVVVAGID AGYNTSMVTD
FCKGKKWCIP TKGVGGEHRP LVEDKVKRNQ RLRRRRKKGM PIEPIGTDQG KALLFARLNL
KPNTERVIDE ESGEIIETIY HSTPGYIHFN NDPSLDDEYF NQLTAEELQT KKRAGREYRQ
WVKTRPRNEA LDCFIGALAI FRMAKEMPTI RRKKFVEQTS QEEGNAEQQS QPTKKPIRQR
RKLRI