Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0672 |
Symbol | |
ID | 3761399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 748484 |
End bp | 750661 |
Gene Length | 2178 bp |
Protein Length | 725 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637785385 |
Product | Phage terminase GpA |
Protein accession | YP_390942 |
Protein GI | 78485017 |
COG category | [R] General function prediction only |
COG ID | [COG5525] Bacteriophage tail assembly protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAACCC TGGCAAAAGC ACAACTCGAA AGAGATAAGA TTAAGGCAAA GCAAGCTCGC AAGTCTTATG AGTTGGCTTT GTCAGAATCC ATGAAAACCG AGCAAGCGGA GACGGTTAAA GCCCTGATCC GAAAGGCGGT TACCAGTCAG TTAAAAAAAC TGACCAAAGA ATTCAGCCAA GTCGTCGATG GCCAGCAGGA TGAAACGCAA ATTCATTACT TGCTCAGTGA CTACTCGCAC GACTGGCTCA AGAGCCTTGG CCATCAGGTA AAAAAACAGC TTGATACCAA AGCGCTTGGC AATACTTTCA AGCAATCTGT CACACCGCGC CAGCTGCTGT CGGTCAGTCA ATGGGCTGAA AAAAATCGTT ACATGAAAAC AGGCACCAAC TTACCTGGTC CATGGCGCAA TGCCAATGCA CCGCATGCCG TGGAAATCAT GGACAGTTTG TCAGTTCATT CACCTGTACG CACGGTTACA TTTATGAAGG CATCCGGTAT CTCCGGCACC GAGATCGGTT TGAATTGGAT CGGCTATGTT ATCGACTATG CGCAAATGGA CATGATTTTT GTCGTGCCGA CGCTTGAGCT TCGAGACAGA ACATTCAACC CAAAGCTTAA ACGCTTATTG ACTGAGACAC CTTGCCTGAA TGATTTGTCA TCCAGTCTAA GTCGAGATGA ATCCAATCGA AAAGACATGC TTGAATTGGG GCCAATGCGA CTAATCAAAT CTGGTGCAAA CTCTGCAGAA AGCTTCCGTG CCGAGCACGT ACCTTATGCC TATGGTGATG AAATCGATGC CTTTCCACTG GATGTCGGTG GAGAGGGTGA TCCCGTCACC CTTATTGAAA ACCGTCAAAA GACCTTTTCA CGCGCCAAGT CGCTTTATAC GTCGACACCA ACCGAGAGAG ATTTCTCATT GGTTGAAGAC CTGTTTGAGT CAGGTGATCA GCGTTACCGT TACATTGCAT GCCCTGAGTG CGGTCATCGC CACACACTTG CATTCAAAAA CTTCAGATGG AAGCTAGATG ACAAGGAACA ACAGGAAGAA GGCGGCAAGA AGATTGTATA TCGCGCATAC TTCGTTTGTC CATCTTGCGA TGCTGAAATC CATGAACACC AAAAAAATAA GCTTCTTGAT GAAGCGGTTT GGATTCCAAA TAACCCAAGC GTTACGAAGC ATCGAAGCTA TCACCTGAAT TCATTTTATA TAAAGTTTGG CCTTGGTTTG ACTTGGAAAG ACATTGCGCA AAAGTGGTTG GACAGCCAAG GCGATACCAA CAAACTTAAA GCATTTACCA ACACTTATCT TGCCGAAACA TGGCGAGAAG ATGCTGAGCG TATGGATGCC ATTTTATTGC TATCACGTAT CGAGTCATTC CCGGAAGAAT TGCCACGTCC AACCACGCGC ATCGCGTTCA CTGACGTGCA GAAAGACCGC CTTGAGCTTA CTATCATCGA TTTTGAAGAC TCAGAAGAAG CATGGGATCA GCAACATATC ATACTGCCTG GTGAAACGGC ATTGCCAGAT GTATGGGATT CACTTGATGA AGAACTCGCC AACCAAAACG TCGTGGTCGC TGGTATCGAT GCCGGTTATA ACACATCCAT GGTCACAGAC TTCTGCAAAG GCAAAAAATG GTGCATTCCA ACCAAAGGGG TTGGCGGTGA GCATCGGCCA CTGGTAGAAG ACAAGGTAAA GCGTAACCAG CGCCTGCGCC GCCGCCGTAA AAAAGGCATG CCAATTGAAC CAATCGGAAC AGACCAAGGC AAGGCACTTT TATTCGCGCG CCTAAACTTA AAACCAAATA CAGAGCGCGT TATCGATGAA GAAAGCGGCG AGATTATCGA AACGATCTAT CACTCAACAC CTGGTTATAT CCACTTTAAC AACGACCCAA GCCTAGATGA TGAATATTTC AACCAGCTGA CAGCTGAAGA ACTGCAAACC AAAAAGCGTG CCGGCCGTGA ATATCGCCAA TGGGTCAAGA CTCGACCACG TAATGAAGCA TTGGATTGCT TTATCGGCGC TTTGGCTATC TTCCGCATGG CGAAAGAAAT GCCAACCATA CGCCGCAAAA AGTTTGTAGA ACAAACATCT CAAGAAGAAG GCAACGCTGA GCAACAATCA CAACCAACCA AAAAACCAAT CCGTCAAAGA CGCAAGCTGA GAATATAG
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Protein sequence | MATLAKAQLE RDKIKAKQAR KSYELALSES MKTEQAETVK ALIRKAVTSQ LKKLTKEFSQ VVDGQQDETQ IHYLLSDYSH DWLKSLGHQV KKQLDTKALG NTFKQSVTPR QLLSVSQWAE KNRYMKTGTN LPGPWRNANA PHAVEIMDSL SVHSPVRTVT FMKASGISGT EIGLNWIGYV IDYAQMDMIF VVPTLELRDR TFNPKLKRLL TETPCLNDLS SSLSRDESNR KDMLELGPMR LIKSGANSAE SFRAEHVPYA YGDEIDAFPL DVGGEGDPVT LIENRQKTFS RAKSLYTSTP TERDFSLVED LFESGDQRYR YIACPECGHR HTLAFKNFRW KLDDKEQQEE GGKKIVYRAY FVCPSCDAEI HEHQKNKLLD EAVWIPNNPS VTKHRSYHLN SFYIKFGLGL TWKDIAQKWL DSQGDTNKLK AFTNTYLAET WREDAERMDA ILLLSRIESF PEELPRPTTR IAFTDVQKDR LELTIIDFED SEEAWDQQHI ILPGETALPD VWDSLDEELA NQNVVVAGID AGYNTSMVTD FCKGKKWCIP TKGVGGEHRP LVEDKVKRNQ RLRRRRKKGM PIEPIGTDQG KALLFARLNL KPNTERVIDE ESGEIIETIY HSTPGYIHFN NDPSLDDEYF NQLTAEELQT KKRAGREYRQ WVKTRPRNEA LDCFIGALAI FRMAKEMPTI RRKKFVEQTS QEEGNAEQQS QPTKKPIRQR RKLRI
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