| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0655 |
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| Symbol | |
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| ID | 3761346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 731804 |
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| End bp | 732529 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637785368 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_390925 |
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| Protein GI | 78485000 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.10472 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACGCCA TTGATCCAAA AACGATTCTT CTTATGCTGA AACCGAAACC TAAATTAATG
TCCATCCCTT TTCAGCTTGA CTGGGTGCTT TATGAAGACG ATGACATTAT CGTTGTTAAC
AAACCGGCCG GACTTCTTTC CGTGCCTGGA AAAGATCTGG ACCCAGAAAT GAATTTGTTA
GCACAAGTTC AAAAACATGT ACCAACGGCT CTCATCGTGC ATCGTTTAGA CATGGATACT
TCCGGCATTA TGATCTTAGC TAAACATAAA GCCAGCCATC GGCACTTAAG CATTCAATTC
CAGGATCGTT TAACAGAAAA AACTTACCAA GCGATCTGCT TCGGAAAACC ATCCACATCG
CAAGGCCACC TTAATTTGCC CATGCGCTGT GATTGGGAAA ACCGGCCGTT ACAAATAATC
GACTTGAAAC AGGGAAAGGC GGCCAGCACT CACTGGAAAT TAACGGCACA ATACGATAAT
GCTTTTGAAG TAAATTTAAC CCCGGTCACT GGCCGCTCAC ATCAATTAAG ACTCCACATG
AAAATGCTTG GTCATCCCAT ATTAGGAGAC AATCTTTACG CGGACCCTCA AAGTTTTGCA
GCTTCCAAAC GCCTATTACT TCACGCTGCC AGCTTAAAAG TAACCCATCC CGTGACGAAA
AAAACAATGC TGTTTGAGCA CCCCACTTCC CTTAAAAAGT TTTTAACTGG CACATTTTCT
GCTTAA
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| Protein sequence | MHAIDPKTIL LMLKPKPKLM SIPFQLDWVL YEDDDIIVVN KPAGLLSVPG KDLDPEMNLL
AQVQKHVPTA LIVHRLDMDT SGIMILAKHK ASHRHLSIQF QDRLTEKTYQ AICFGKPSTS
QGHLNLPMRC DWENRPLQII DLKQGKAAST HWKLTAQYDN AFEVNLTPVT GRSHQLRLHM
KMLGHPILGD NLYADPQSFA ASKRLLLHAA SLKVTHPVTK KTMLFEHPTS LKKFLTGTFS
A
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