| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0643 |
|---|
| Symbol | |
|---|
| ID | 3760482 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | + |
|---|
| Start bp | 721171 |
|---|
| End bp | 722760 |
|---|
| Gene Length | 1590 bp |
|---|
| Protein Length | 529 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637785356 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_390913 |
|---|
| Protein GI | 78484988 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGATTATA TTCTGTATTT AAAAGAAAAA GACATCACCG TGATTGAGCG ACAATCATTT
TGTAAACTCG ATCATCAAGT GTTGACGCTC AATTGGCAGG ATGACTCAAC TGAAATCTTT
TTAAAAGGTC TTTCTAAATA CAGTACGGTC AGTGTGGTGT TGGATTTTAT TGATGAAAAT
CTGCGTTATG AATGGGTGCC TAAGCTCCTG CCATGGGAAA AGCCTTCTAT GGAGAAACGT
CTAACCGCTA AGGCGAAATC GGAAGGCAGT TTATTTGTCC ATACGCAATG GCTACCGGTT
TTTCGAACCA ACGCTTCGGG ACGAGAAGAA CAACAGCTTT TAATTGCCAG TGTGCTGCGC
TCGCCAGAAG TTGAGCACTT ATTCAATCTG TTTGAAACCT TGCAAGTAAC TTTAGTGGGT
GTTTATTCTT ATGCATTTTT AATGGGCGAC TTTTTCTTTG CCAAGGTGGC GCCACGCCTT
AAAATCAGCC GCAAGCAATT AAACACTCCT TTTTTACTGG TTTTAAGAGA AAGTCATTGC
CACTTTCGTC AGGTATTTTT TCATCATGGC GTGTTAAAAA TCAGCCGTCA TATTGATTTA
GAATTGGCTC CTCATGATAA AGAGCCAGTT TTCCCAGCGT TAATTCATGA AACTAAAATT
ACCGTTAAGT ATCTATACAA CCAAAAGATT TTGCCGATCA ATGCCGAAGT CGGTTTTGTT
TATTTGGATG TTGAGCGAGA CAATGAAGAA CAGGTGATTG AACAATTCAA ACAGATGATC
CCGTTTTCAA ATTGGCAAAG CGCTAATTGG TTTGCTAAAT CCGGTAATTT GAATGAGCTG
TTAAATATAC ATGAGCACTG CCAAAATCAG GGAGCCCTGA ATGTGTTAAT GACCTTTTTG
TTCAAGGCCA GGCCTGGTAA TTTTTACCGT GTGCTCTATG CGGAAAGTGT CAGACGATTC
CTGGCGATTC GTAAAGGTCT ACATGCGCTA TGGATAACCG GTGCGCTGGT AGGAAGTTAT
GCGTTCATCC AGCAAGGGAT TGATGATTAT CTGTTGTCTG AGAAAAAGCA ATGGATCGAA
TCCCAAAGTC ATCAGCTTGG GATAGAAAAA AGCCGGTTAC AGCGTTCAAT TAATTTGAAA
TATAATGCGG AAGACATCAA AGCGATTGTC GAATTTTCGG AATCGTTATT ACAAAATCAA
CCAGCCCATT TTTTTAAACA GGATCTTATT TTTTTAAGCC AAGTTCTGCA ACAGAATCCC
CATATTTTAA TGACGGAATT GACGTGGCAA ATTAACCAGA AGTTTGACAG CGAAATGCTT
TCAGTGTCTT TGTCAGGACA AGTGTTTCCC TTTAATAAAA CCTACGAAAT GCCTGTTAAA
TGGGTGGATG ACTTTGTATC GGATTTGATG GAATCACCAA GAGTACACTC TGTGGAATTG
GTTCAAGAGC CGCTCAATCG ACGTGTTCAG AAATCGCTGG AGGTGGATGG TAAGTCAATC
GATAATGATC AGGCCTTACC TTTTGCCGTC CGGTTTAAAA TTCGAAGTGA TCGAATGACG
CCGAGCGCAT CAGGAGATAA GACAGAATGA
|
|---|
| Protein sequence | MDYILYLKEK DITVIERQSF CKLDHQVLTL NWQDDSTEIF LKGLSKYSTV SVVLDFIDEN
LRYEWVPKLL PWEKPSMEKR LTAKAKSEGS LFVHTQWLPV FRTNASGREE QQLLIASVLR
SPEVEHLFNL FETLQVTLVG VYSYAFLMGD FFFAKVAPRL KISRKQLNTP FLLVLRESHC
HFRQVFFHHG VLKISRHIDL ELAPHDKEPV FPALIHETKI TVKYLYNQKI LPINAEVGFV
YLDVERDNEE QVIEQFKQMI PFSNWQSANW FAKSGNLNEL LNIHEHCQNQ GALNVLMTFL
FKARPGNFYR VLYAESVRRF LAIRKGLHAL WITGALVGSY AFIQQGIDDY LLSEKKQWIE
SQSHQLGIEK SRLQRSINLK YNAEDIKAIV EFSESLLQNQ PAHFFKQDLI FLSQVLQQNP
HILMTELTWQ INQKFDSEML SVSLSGQVFP FNKTYEMPVK WVDDFVSDLM ESPRVHSVEL
VQEPLNRRVQ KSLEVDGKSI DNDQALPFAV RFKIRSDRMT PSASGDKTE
|
|---|
| |