Gene Tcr_0640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0640 
Symbol 
ID3760479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp716714 
End bp718264 
Gene Length1551 bp 
Protein Length516 aa 
Translation table11 
GC content41% 
IMG OID637785353 
ProductTPR repeat-containing protein 
Protein accessionYP_390910 
Protein GI78484985 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG3071] Uncharacterized enzyme of heme biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGTGT TGTTAGAAGC TTTAAAAAAA GCCGCGGAAG AAAAACAACG GAAACTATCC 
GGTGATGAAG CTTCTTTGCT TGCGAGCAAT GAACCTGCCT CTATCCAAAC AGAAGAGACA
ACACCTGAGA ATGCTAGTGA ATTTAATAAA CCAACGGATA ACGAAACATT AAAAGAAGAC
TCAACATTTA AAATTGTTGA GGAAGATGTT CCTTCTTTAG CCCTTTCAAA AAAGAAACCT
CTAGATTTGG AAACCAGTCT TGCTTTGGAA GACTCTCCTC TTTCAAATAG AACTGTTTTA
GATGAAAAAA TAGAGGTAGA AGAACCGGTG CGACCTTTGG TTGACCCGGT CAAACAAGAT
GAAGAAGGTT TAAATTCCAC ATATTCTGCT TCATTCGCAC ATCAGGCGGT TGAAAAAGAT
TGGAGTTTGA ATCAGATTCC AGGGTATCAG GATCGCGAAA GCGATGTGCA AAGTGGTTCA
AAACCTGCTC AAAGTATTTT ACAGGCGATG CAATTTAAAC AGGAACGAGC GCCTGATTAT
TCCAAACTTG TTTTGTCCGG TTTGGTCTCC ATGACGCTGC TTCTCGGGCT TAGTTATTAC
GGGGTCGTTT ATTTTCAAAA GCAATCCGAA AAAATGACCA CCGAGTTACA GTCGTATCAG
AGTGTTGAAG CCCCACTAAA AGGGCAGACA AGTGAGGTGG GTGATCAGAA TCCTCCAGAA
GTATCAGATA ACCATTTAGC GGTGGAATCA AAGAGTGTTC ATGGGCAGGC AGCCAAAGGT
GAGAAACCTG TGGAGCAAAC TGAAAGGTCT AGGTCGACTG AAGATGTCTC TTCAACAAAA
CCGTTAGTTA AAAAAAGCAC AGTTGTCTCG GATGAAAAGC CAAGAAAAAA AGCCGAACCT
TCTCAAGTGT TAAAGGCCAT TCCGGAACCG AGTAAGCAAT TGAAAATTGT GAGTTCAACC
TTGGTATCGG ATGAAATGTT AGGGTATGAA GCCTACCAAA AAAATGATTT TCAACAGGCT
GAGCAGCACT ATTTAGCTGC GTTGAAAAAA AATCCCAAAA ACTTGACTGC CTTGTTTGGT
ATGGGGGCGA CTGCGGCTAA ACAAGGTGAA GTGCATGCCG CTTTGAATTT TTATCGTCAG
GCATTGGATG TTTCTCCCTA TAATAAAGAA GCTGAAACGG CCGTGGCTAT TCTGGAAGCG
ACTTTAACGC AGTCCGAGCC AGCCTCTAAG CGATTGAAAT TTATGATTAA TCAATCACCT
AATAATGCCA AACTGCATGC CGCGCTTGGG CACCAATATG CAAAACAAAA AAATTGGATC
AAGGCACAGA AACAGTATTT CAACGCTTAT CAGCTCAACC CTGATAATGC CGACTATGCG
CTTAATTTGG CCATTAGTTT AGATCAAATC GGTCAATACT CCTTGGCAAA ACAATATTAT
CAACGAGTAC TGGTTCATTC TCATAAAAAG AGAACCGAAG TCAGTGTCAG ACAGATTAAA
AACCGTTTAT TAACTCTGCA ACAATATTTA GAGCAGGGAG GTGACCAGTG A
 
Protein sequence
MSVLLEALKK AAEEKQRKLS GDEASLLASN EPASIQTEET TPENASEFNK PTDNETLKED 
STFKIVEEDV PSLALSKKKP LDLETSLALE DSPLSNRTVL DEKIEVEEPV RPLVDPVKQD
EEGLNSTYSA SFAHQAVEKD WSLNQIPGYQ DRESDVQSGS KPAQSILQAM QFKQERAPDY
SKLVLSGLVS MTLLLGLSYY GVVYFQKQSE KMTTELQSYQ SVEAPLKGQT SEVGDQNPPE
VSDNHLAVES KSVHGQAAKG EKPVEQTERS RSTEDVSSTK PLVKKSTVVS DEKPRKKAEP
SQVLKAIPEP SKQLKIVSST LVSDEMLGYE AYQKNDFQQA EQHYLAALKK NPKNLTALFG
MGATAAKQGE VHAALNFYRQ ALDVSPYNKE AETAVAILEA TLTQSEPASK RLKFMINQSP
NNAKLHAALG HQYAKQKNWI KAQKQYFNAY QLNPDNADYA LNLAISLDQI GQYSLAKQYY
QRVLVHSHKK RTEVSVRQIK NRLLTLQQYL EQGGDQ