Gene Tcr_0634 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0634 
Symbol 
ID3760473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand+ 
Start bp709998 
End bp711701 
Gene Length1704 bp 
Protein Length567 aa 
Translation table11 
GC content46% 
IMG OID637785347 
Productacetolactate synthase, large subunit, biosynthetic type 
Protein accessionYP_390904 
Protein GI78484979 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 
TIGRFAM ID[TIGR00118] acetolactate synthase, large subunit, biosynthetic type 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.876407 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAATTAA CTGGTGCCCA GATTCTTGTA CATTATTTGG AAGATGAGGG CGTAGAGCAT 
ATTTGGGGGT ATCCTGGTGG TGCAGCTTTG CCAATCTATG ATGCCCTAGA TACGGACGCA 
AAAAAATTAA AGCACGTGCT TGTCCGTCAT GAACAGGCTG CCGTTCATGC AGCTGATGGG 
TTCTCACGCT CTACAGGTTT ACCAGGAGTC GCGCTTGTAA CTTCCGGCCC CGGTGCTACC 
AATACCGTGA CAGGTATTGC GACAGCTTAT ATGGATTCGA TTCCATTGAT TGTCATCACC 
GGGCAGGTTG CCACGAATAT GATCGGTTTG GATGCATTCC AAGAAATCGA TACGGTGGGG 
ATTACAAGAC CGATTGTTAA ACACAACTTC TTGGTCAAGG ATGTCAATGA CCTCGCGATG 
ACGCTCAAAA AAGCGTTTTA TATCGCAACG ACTGGTAGAC CCGGTCCAGT TGTGGTCGAT 
ATCCCGAAAG ATGTACAAAA TGCCAAAAGC TCTTATGAAT ATCCACAAGA AGTGAGTTTA 
CGCTCCTATG TACCTGTAAC GAAAGGCCAT AGCGGACAAA TTAAAAAAGC CATCGATATG 
ATGTTGGCGG CGAAAAAGCC CATTATTTAC ACGGGCGGCG GCGTGGTGTT AGGGGGTGCC 
TCTGAAGCAT TGACTGACTT AGCGCGTCAA TTAGGTTATC CCGTTACCAA TACATTGATG 
GGGCTAGGTG CTTATCCAGC TGAAGACAAA CAATTTGTCG GTATGTTAGG CATGCATGGA 
ACCTATGAAG CGAATCTGAC CATGCATAAT TCGGATTTAA TTATTGCGAT TGGTGCACGA 
TTTGATGATC GAGTGACCGG GAATTTAGAG AAGTTCTGTC CGGATGCAAA AGTCATTCAT 
GTGGATATTG ACCCAGCGTC AATTTCAAAG AATGTTGTGG TTGATATTCC GATTGTCGGC 
CCGGTCAAGC AAGTGCTAAA TGAAATGTTG TCTTTGCTGG CTAAAACGAA GAAACGTCCA 
GATCAAGAAG CACTGGCTAG CTGGTGGGAG CAAATTGAAA GCTGGCGTTC GACAAACTGT 
TTGCGTTATG AGCAGTTGGG TCACAAAATC AAGCCTCAAG CGGCGATGGA AACCGTGTGG 
CAGGTCACTA ATGGCGATGC TTATGTTACT TCAGATGTTG GGCAGCATCA GATGTTTGCT 
GCACAGTACT ATAAGTTTAA TAAGCCTCGC CGTTGGATTA ACTCGGGTGG TTTAGGCACG 
ATGGGCTTCG GTTTACCTGC TGCAATGGGT GTGCAAGCCG CATTTCCGGA CGCAACGGTG 
GTGTGTGTGA CCGGTGAAGG TTCGATTCAG ATGAACATTC AAGAGCTTTC AACGTGTTTG 
CAGTATGGAT TGCCGATCAA GGTGCTGTGT TTAAATAACG GTTTCCTGGG GATGGTGCGT 
CAATGGCAAG AATTCTTCTA TGACCGTCGT TATTCCATGT CTTATATGGA CTCTTTACCT 
GACTTTGTTA AGTTGGCTGA AGCCTATGGG CATGTAGGGA TTCGCATTGA TAACCCGGAA 
ACTATGAAAG AGCAACTTGA AGAAGCGTTT TCCGATAAGT ACAAAGATCG TTTTGTTTTT 
ATTGATGTCA TTACGGATCA ACAAGAAAAC GTTTATCCAA TGATTCCTGC GGGTGCAGGG 
CTTGACGAAA TGATTCTGGT ATAA
 
Protein sequence
MELTGAQILV HYLEDEGVEH IWGYPGGAAL PIYDALDTDA KKLKHVLVRH EQAAVHAADG 
FSRSTGLPGV ALVTSGPGAT NTVTGIATAY MDSIPLIVIT GQVATNMIGL DAFQEIDTVG 
ITRPIVKHNF LVKDVNDLAM TLKKAFYIAT TGRPGPVVVD IPKDVQNAKS SYEYPQEVSL 
RSYVPVTKGH SGQIKKAIDM MLAAKKPIIY TGGGVVLGGA SEALTDLARQ LGYPVTNTLM 
GLGAYPAEDK QFVGMLGMHG TYEANLTMHN SDLIIAIGAR FDDRVTGNLE KFCPDAKVIH 
VDIDPASISK NVVVDIPIVG PVKQVLNEML SLLAKTKKRP DQEALASWWE QIESWRSTNC 
LRYEQLGHKI KPQAAMETVW QVTNGDAYVT SDVGQHQMFA AQYYKFNKPR RWINSGGLGT 
MGFGLPAAMG VQAAFPDATV VCVTGEGSIQ MNIQELSTCL QYGLPIKVLC LNNGFLGMVR 
QWQEFFYDRR YSMSYMDSLP DFVKLAEAYG HVGIRIDNPE TMKEQLEEAF SDKYKDRFVF 
IDVITDQQEN VYPMIPAGAG LDEMILV