Gene Tcr_0633 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0633 
Symbol 
ID3760472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand+ 
Start bp709227 
End bp709781 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content44% 
IMG OID637785346 
Productoligoribonuclease 
Protein accessionYP_390903 
Protein GI78484978 
COG category[A] RNA processing and modification 
COG ID[COG1949] Oligoribonuclease (3'->5' exoribonuclease) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.840198 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCAG AAAATAACCT GATCTGGATT GATTTGGAAA TGACCGGATT GGATCATAAA 
GCAGATCAAA TTATTGAAAT TGCAACAGTT GTGACCGATG CCGAGTTGAA TGTGCTTGCA 
GAGGGGCCGG TTATGGCCAT TCAAACTGAG CAACATTATT TAGATGGAAT GGATGCTTGG 
TGTACCACGC ACCATGGCAA CTCAGGACTC ACCAAGCGGG TTCAGGAAAG CACGATCACG 
ATGGCGCAAG CCGAACAAGA AACGATTAAG TTTTTAAAGC CCTATGTGCC GAAAGGCAAA 
TCGCCAATGT GTGGTAACAG TATTTGCCAG GATCGCCGTT TTTTGATTGA ACAAATGCCC 
GAACTGGAGC AGTTTTTTCA TTATCGAAAT CTGGATGTGT CCAGTTTGAA AGAGCTGGCA 
AGACGCTGGG CTCCGACTGT TTACAGTGGG TATAAGAAAA AGGGCGCACA CCTGGCACTG 
GATGATATTT ATGAGTCGAT TGAGGAGTTG AAATACTATC GACAAAATTT GTTTTTGCCT 
GAGTTTCAGC AATAG
 
Protein sequence
MKSENNLIWI DLEMTGLDHK ADQIIEIATV VTDAELNVLA EGPVMAIQTE QHYLDGMDAW 
CTTHHGNSGL TKRVQESTIT MAQAEQETIK FLKPYVPKGK SPMCGNSICQ DRRFLIEQMP 
ELEQFFHYRN LDVSSLKELA RRWAPTVYSG YKKKGAHLAL DDIYESIEEL KYYRQNLFLP 
EFQQ