| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0627 |
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| Symbol | |
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| ID | 3760349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 703587 |
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| End bp | 704816 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637785340 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_390897 |
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| Protein GI | 78484972 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000000190439 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGACA AATCACTTGC TAAAGATAAA ATTAAAATCT TACTCCTTGA AGGACTGCAC
CAAAGTGCCG TCGAGGTATT TAATGAGAAC GGCTACAACA ACATTGAGTA TGTTAAAGGT
TCCCTTTCTG ACAAGGACTT AAAAGAAAAA ATTGCCGATG TACACTTTGT TGGCATCCGT
TCACGCACAA ACTTAACGGA AGATGTCTTT AAAGTAGCGA AAAAACTTGT CGGTGTCGGC
TGTTTTTGTA TTGGAACCAA CCAAGTGGAT TTAAAAGCCG CACAAAAACG CGGAATCCCT
GTTTTCAATG CGCCCTTTTC CAACACTCGC TCGGTGGCCG AACTGGTTTT AGGTGAAATT
TTATTACTGC TAAGAGACAT TCCTGCCAAA AACGCTAAAG TCCATCGTGG CGAATGGGAT
AAATCGGCAA CAGGATCAGT AGAAGCACGC GGTAAAACAC TCGGCATTGT CGGCTATGGC
CATATTGGAA TCCAATTGAG CATCATGGCG GAAAACATTG GGATGAAAGT CCGTTTCCAC
GACATTGAAA CCAAACTTCC GTTAAGCAAC GCATCGCAGG TAAAATCATT AGAAGAATTG
TTAAAGATCT CTGACATTGT GTCTCTGCAC GTTCCAGAAA CTGAAGAAAC ACAGAATATG
ATGGGCGCAG AGCAGTTTGC ATTGATGAAA AAAGGATCGA TCTTCATCAA TGCCGCGCGA
GGTACCGTGG TGGATGTTAA TGCTCTGGCG GATGCCATTA AATCCGGTCA CCTTTCTGGC
GCCGCGGTAG ATGTATTCCC TGTTGAGCCT AAGTCCAATA ATGAAGAGTT TGTCTCTCCT
TTGAGAGGAC TGGACAACGT TATCCTGACA CCTCACATTG GTGGAAGCAC GGAAGAAGCG
CAAGAGAACA TTGGGCAGGA AGTCGCCACA AAACTGGTTC GTTATTCGGA TACTGGAACG
ACATTATCGG CGAAGAACTT CCCAGAAGTT TCTTTACCGG AACATAAAGA CAGAAGCCGT
TTACTGCATA TTCATAAAAA CCAGCCCGGC ATCATGACCA AAATCAATGA AGCCTTTGCG
CATAAAGGCA TTAATGTAGC AGCTCAATAT CTGCAAACCA ATGCCGAAAT TGGGTATGTT
GTCATCGACA TTAACTCTGA AGACCGCGAA GCAGGCTTGA AAGAGTTGAA AGCCATCGAA
GGAACGATTC GCACACGCGT TCTTCACTAA
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| Protein sequence | MNDKSLAKDK IKILLLEGLH QSAVEVFNEN GYNNIEYVKG SLSDKDLKEK IADVHFVGIR
SRTNLTEDVF KVAKKLVGVG CFCIGTNQVD LKAAQKRGIP VFNAPFSNTR SVAELVLGEI
LLLLRDIPAK NAKVHRGEWD KSATGSVEAR GKTLGIVGYG HIGIQLSIMA ENIGMKVRFH
DIETKLPLSN ASQVKSLEEL LKISDIVSLH VPETEETQNM MGAEQFALMK KGSIFINAAR
GTVVDVNALA DAIKSGHLSG AAVDVFPVEP KSNNEEFVSP LRGLDNVILT PHIGGSTEEA
QENIGQEVAT KLVRYSDTGT TLSAKNFPEV SLPEHKDRSR LLHIHKNQPG IMTKINEAFA
HKGINVAAQY LQTNAEIGYV VIDINSEDRE AGLKELKAIE GTIRTRVLH
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