| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0626 |
|---|
| Symbol | |
|---|
| ID | 3760348 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | - |
|---|
| Start bp | 700616 |
|---|
| End bp | 703408 |
|---|
| Gene Length | 2793 bp |
|---|
| Protein Length | 930 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637785339 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_390896 |
|---|
| Protein GI | 78484971 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0247] Fe-S oxidoreductase
[COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTTCAA CTGATGCTTC CGTATTTGAA ATTTTTCCAC AAGAGTTTCT TTACCCTAAA
GACATCGAAG CGTTACAGCA TCGCATTCAA TTGGCTCTTG AAAAAAAACA AGCCATTACC
ATGCGTGCAG GGGGAACGTC ACTGGGCGGT CAAGCCATCG GTTCAGGGCT ACTAATCGAT
ATTTCTAAAC ATTTAACGCA AATTTTGGAC TACCGTCCTG AACAAAAAGA AGTCGATGTT
CAGCCTGGGG TGATTCAAGA CGACCTGAAT GACTTTGTCA AAGCGGATAA CCTGCGTTTT
GCTCCGGATA CGTCCACCTC AAACCGCGCC ATGATTGGTG GCATGATTGG TAACAACTCC
TGTGGCTCTT ATTCGGTTTA CTATGGCACC ACACGTGACC ATGTGAAATC GGTTGACGTC
ATTCTAGCCG ATGGTTCTTT AGTCAGCTTT CATGACTTAA CACCAGAGCA ACTGCACGAA
AAACTTTCAT TACAGACTTT GGAAGGTGAG ATTTATCGCA CGGTTGTCAA CATGCTGGAA
GAACACGGAC AGGAAATTGT CGATAACTTC CCAGATCCCT CTATTGTTCG CCGCACCACT
GGCTATGCGC TGGATGTTTT GTATTCGGAC TATCAGCCTT TCAATCCTGA AGGCAAGCCG
TTTAACCTCA CCCCGTTGAT TTGTGGCAGT GAAGGAACAT TGGGTGTCAT CACTAAGGCA
ACATTGAATT TAGTGGAGCT TCCTAAACAC CGTCAGCTGC TTTGTGCACA TTTCGATTCG
ATCTATACCG CCATGCAAGT TGTTCCGAAT TACTTGCCAT TCAAGCCTGC GGCGATTGAA
TTGATTGATA AAGCCACTTT GGATGGCACC AAAAACAACA GTGAACAGAC CCAAAATCGT
TTATGGGTTA AAAAAGATCC TGAAGCCGTA TTGGTGGTTG AACTCTTTGA TGAAGAGGCT
GAAAATCTGC AACGCCGTCT AAAAAATGAC CAGGCCTGGA TGTTGGAACA AGGTGCTTAT
GCGTGCCCGA TTATCGAACC ACAAGACAGT GCAAAAGTAT GGAACCTGCG TAAAGCCGGG
TTGGGACTGT TGATGGGCAA ACCCACGCGC CATAAAGCGG TTGCGGTTAT CGAGGATGCG
GCCGTTCCGG TAAAATCGTT GCCCGAGTTC TATCAGGACA CACAAGACTT AATGACCGAA
CTGGGTATTG GGTGTGTCTA TTATGGCCAT GCCTCAGTCG GTCTGATTCA TGTACGTCCG
GAAATGGATT TGGCCACCCC GGAAGGCAAA CGCTATTTCC AAACCGTGGC GGAACGCAGT
TCAAAGTTGG TCAAAAAATA CCGCGGCGCT ATTTCGGGTG AACACGGTGA TGGCCGTATT
CGTGCCCCTT TCATTAAAGA ACAAGTGGGC GAGAATGTTT ACGCTTGCTT GGTGCAGCTT
AAAAACACAT TTGATCCAGA CAATTTATTC AACCCTGGTG TGATTATTGG CGACGCCTCA
ATCACAGAAA ACCTGCGTGC GGATCGCCAA CCGAAACAAC TGCTGAGCCC AGGCTATGAT
TGGACTCGAG ATTTATCCTT AATGGATGCC GTTGAAAAAT GTAACGGTGC TGGTGCTTGT
CGAAAATCTG CCGGAAATGG GGTTATGTGC CCATCTTACC AAGCCACGCG GGAGGAAAAC
TATTCCACTC GTGGCCGAAG CAATTTATTG CGCCATGCCT TGACTGAACC GAATCCGTTA
GCCGCGCTGA AAAAAGACGA ACTACAAGAT GCCCTGTCAC TGTGCTTAGG GTGTAAAGCC
TGTAAATCGG AATGCCCAGC CAGCGTTGAC ATGGCTCGTC TTAAATCAGA AGTGCTGTAC
CAGATCAATG CTTTCTCACT GAGCCGAATG TCCATTAAAT TTTACGGACA GCTCATGAAA
ATGGGCGCGT GGGTTCCCGG AACTTACAAC TGGGTTCAAA ACCTGTCTTT GGTTAAAAAA
ATCATGGGCG TAGACACACG TCGTACGCTA CCAAAGCTGG ATAAACAGTC ATTAAGAGCT
TGGTGGAAAA CCTACGCTAA ACAGAGTCAC TTTGATGCGA ACAAACCAAC AGTCTGGGTG
CTCATCGATT TATACGTTCA ATATCAAGAA CCTAAAATCG GACAAGCCAC TATACAATCA
TTAGAGTTAC TGGGCTTGAA TGTCAAACCC ATTTTCCTTG ACAGCTCACC TCGTGCTTTA
TTAAGCCAAG GTCTCGTGTC GGAAGCAAAG CAGGCGCTGG AGGCAATCCA ATCACAATTG
AAAGAGGCAA CCTTGGATGA TCACATTGTT GGGATCGAAC CTTCTGACAC CCTAGTTTGG
CGAGATGAAG CGAAAGACCT CATTTCAAAA AATGACCAGG CCTGGCTTTA TACGTCGGTG
CTGCTATTTG AAGAATTGAT GCTAAAACTG AATACCCAAT CTAAATTGGC ATTAGGCGCC
GTTCCGAAGA ATGCTTGGTT GCATGTGCAC TGTCACCAAA AATCTTTGGC GCATGCACAA
GAATCGGTTA AGGCATTAAA TTTAATTCCA GAACTGAACT TGCAGTATAT CAATTCAGGG
TGTTGCGGCA TGTCCGGTGA GTTTGGTTAT AAAAATTATG ATGTGTCATT GAAGATTGCC
AACCAAACCT TATTACCGAC TTTGAAAAAT GCACAACAAG ATGACTTGGT GATTGCAACA
GGAACGAGCT GTCGTCACCA GCTAGAAGAT TTCGCCGACA GACAAGGCCT TCACCCAGCT
GAACTCTTTT TCATGGCGTT AAGCAACCGA TAA
|
|---|
| Protein sequence | MISTDASVFE IFPQEFLYPK DIEALQHRIQ LALEKKQAIT MRAGGTSLGG QAIGSGLLID
ISKHLTQILD YRPEQKEVDV QPGVIQDDLN DFVKADNLRF APDTSTSNRA MIGGMIGNNS
CGSYSVYYGT TRDHVKSVDV ILADGSLVSF HDLTPEQLHE KLSLQTLEGE IYRTVVNMLE
EHGQEIVDNF PDPSIVRRTT GYALDVLYSD YQPFNPEGKP FNLTPLICGS EGTLGVITKA
TLNLVELPKH RQLLCAHFDS IYTAMQVVPN YLPFKPAAIE LIDKATLDGT KNNSEQTQNR
LWVKKDPEAV LVVELFDEEA ENLQRRLKND QAWMLEQGAY ACPIIEPQDS AKVWNLRKAG
LGLLMGKPTR HKAVAVIEDA AVPVKSLPEF YQDTQDLMTE LGIGCVYYGH ASVGLIHVRP
EMDLATPEGK RYFQTVAERS SKLVKKYRGA ISGEHGDGRI RAPFIKEQVG ENVYACLVQL
KNTFDPDNLF NPGVIIGDAS ITENLRADRQ PKQLLSPGYD WTRDLSLMDA VEKCNGAGAC
RKSAGNGVMC PSYQATREEN YSTRGRSNLL RHALTEPNPL AALKKDELQD ALSLCLGCKA
CKSECPASVD MARLKSEVLY QINAFSLSRM SIKFYGQLMK MGAWVPGTYN WVQNLSLVKK
IMGVDTRRTL PKLDKQSLRA WWKTYAKQSH FDANKPTVWV LIDLYVQYQE PKIGQATIQS
LELLGLNVKP IFLDSSPRAL LSQGLVSEAK QALEAIQSQL KEATLDDHIV GIEPSDTLVW
RDEAKDLISK NDQAWLYTSV LLFEELMLKL NTQSKLALGA VPKNAWLHVH CHQKSLAHAQ
ESVKALNLIP ELNLQYINSG CCGMSGEFGY KNYDVSLKIA NQTLLPTLKN AQQDDLVIAT
GTSCRHQLED FADRQGLHPA ELFFMALSNR
|
|---|
| |